ENSMUSG00000034317


Mus musculus

Features
Gene ID: ENSMUSG00000034317
  
Biological name :Trim59
  
Synonyms : Q922Y2 / Trim59 / Tripartite motif-containing protein 59
  
Possible biological names infered from orthology : Q8IWR1 / tripartite motif containing 59
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: E1
Gene start: 69035288
Gene end: 69044755
  
Corresponding Affymetrix probe sets: 10498620 (MoGene1.0st)   1416118_at (Mouse Genome 430 2.0 Array)   1431430_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000103432
Ensembl peptide - ENSMUSP00000120270
NCBI entrez gene - 66949     See in Manteia.
MGI - MGI:1914199
RefSeq - XM_011240201
RefSeq - NM_025863
RefSeq - XM_006501917
RefSeq - XM_011240200
RefSeq Peptide - NP_080139
swissprot - D3Z0I5
swissprot - Q922Y2
Ensembl - ENSMUSG00000034317
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trim59ENSDARG00000079238Danio rerio
 TRIM59ENSGALG00000023571Gallus gallus
 Q8IWR1ENSG00000213186Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9CYB0 / Trim13 / E3 ubiquitin-protein ligase TRIM13 / O60858* / tripartite motif containing 13*ENSMUSG0000003523528


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043124 negative regulation of I-kappaB kinase/NF-kappaB signaling IEA
 biological_processGO:0045087 innate immune response IDA
 biological_processGO:0046597 negative regulation of viral entry into host cell IDA
 biological_processGO:0060271 cilium assembly IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005813 centrosome IBA
 cellular_componentGO:0005929 cilium IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030992 intraciliary transport particle B IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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