ENSMUSG00000034911


Mus musculus

Features
Gene ID: ENSMUSG00000034911
  
Biological name :Ushbp1
  
Synonyms : Q8R370 / USH1 protein network component harmonin binding protein 1 / Ushbp1
  
Possible biological names infered from orthology : Q8N6Y0
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: B3.3
Gene start: 71384272
Gene end: 71395802
  
Corresponding Affymetrix probe sets: 10579486 (MoGene1.0st)   1451500_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000045668
Ensembl peptide - ENSMUSP00000148319
NCBI entrez gene - 234395     See in Manteia.
MGI - MGI:1922920
RefSeq - XM_006509658
RefSeq - NM_181418
RefSeq - XM_006509656
RefSeq - XM_006509657
RefSeq Peptide - NP_852083
swissprot - A0A1D5RLD3
swissprot - Q8R370
Ensembl - ENSMUSG00000034911
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000037526Gallus gallus
 Q8N6Y0ENSG00000130307Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Mcc / mutated in colorectal cancers / P23508*ENSMUSG0000007185625


Protein motifs (from Interpro)
Interpro ID Name
 IPR019536  Usher syndrome type-1C protein-binding protein 1, PDZ domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0030165 PDZ domain binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002644 decreased circulating triglyceride level "lower than normal concentration of triacylglycerols in the blood" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
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Allelic Composition: Srrm4tm1e(EUCOMM)Wtsi/Srrm4tm1e(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Srrm4tm1e(EUCOMM)Wtsi/Wtsi

 MP:0003442 decreased circulating glycerol level "lower than normal concentration of glycerol in the blood" [smb:Susan M Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Srrm4tm1e(EUCOMM)Wtsi/Srrm4tm1e(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Srrm4tm1e(EUCOMM)Wtsi/Wtsi

 MP:0004609 vertebral fusion "the union of one or more vertebrae into a single structure" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Srrm4tm1e(EUCOMM)Wtsi/Srrm4tm1e(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Srrm4tm1e(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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