ENSMUSG00000036120


Mus musculus

Features
Gene ID: ENSMUSG00000036120
  
Biological name :Rfxank
  
Synonyms : Q9Z205 / regulatory factor X-associated ankyrin-containing protein / Rfxank
  
Possible biological names infered from orthology : O14593
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: B3.3
Gene start: 70130794
Gene end: 70139154
  
Corresponding Affymetrix probe sets: 10579181 (MoGene1.0st)   1419310_s_at (Mouse Genome 430 2.0 Array)   1425670_at (Mouse Genome 430 2.0 Array)   1455371_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000075140
Ensembl peptide - ENSMUSP00000148739
NCBI entrez gene - 19727     See in Manteia.
MGI - MGI:1333865
RefSeq - NM_011266
RefSeq - NM_001025589
RefSeq Peptide - NP_001020760
RefSeq Peptide - NP_035396
swissprot - Q53X17
swissprot - Q543F0
swissprot - Q9Z205
Ensembl - ENSMUSG00000036120
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rfxankENSDARG00000016730Danio rerio
 RFXANKENSGALG00000037261Gallus gallus
 O14593ENSG00000064490Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ankra2 / Q99PE2 / Ankyrin repeat family A protein 2 / Q9H9E1* / ankyrin repeat family A member 2*ENSMUSG0000002166148


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR017362  DNA-binding, RFXANK
 IPR020683  Ankyrin repeat-containing domain
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007265 Ras protein signal transduction IPI
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 cellular_componentGO:0005634 nucleus IGI
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0045171 intercellular bridge IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042826 histone deacetylase binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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