ENSMUSG00000036160


Mus musculus

Features
Gene ID: ENSMUSG00000036160
  
Biological name :Surf6
  
Synonyms : P70279 / Surf6 / surfeit gene 6
  
Possible biological names infered from orthology : O75683 / surfeit 6
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: A3
Gene start: 26888628
Gene end: 26902879
  
Corresponding Affymetrix probe sets: 10481122 (MoGene1.0st)   1416864_at (Mouse Genome 430 2.0 Array)   1459331_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000109677
Ensembl peptide - ENSMUSP00000048457
NCBI entrez gene - 20935     See in Manteia.
MGI - MGI:98447
RefSeq - NM_009298
RefSeq Peptide - NP_033324
swissprot - A2ALA0
swissprot - P70279
swissprot - Q3V1X4
Ensembl - ENSMUSG00000036160
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 surf6ENSDARG00000035427Danio rerio
 SURF6ENSGALG00000038413Gallus gallus
 SURF6ENSG00000148296Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007019  Surfeit locus 6
 IPR029190  Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042254 ribosome biogenesis IMP
 biological_processGO:0042255 ribosome assembly NAS
 biological_processGO:0042273 ribosomal large subunit biogenesis IBA
 biological_processGO:0042274 ribosomal small subunit biogenesis IBA
 cellular_componentGO:0001652 granular component IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr