ENSMUSG00000036169


Mus musculus

Features
Gene ID: ENSMUSG00000036169
  
Biological name :Sostdc1
  
Synonyms : Q9CQN4 / Sclerostin domain-containing protein 1 / Sostdc1
  
Possible biological names infered from orthology : Q6X4U4 / sclerostin domain containing 1
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: A3
Gene start: 36314139
Gene end: 36318452
  
Corresponding Affymetrix probe sets: 10395389 (MoGene1.0st)   1449340_at (Mouse Genome 430 2.0 Array)   1460250_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000040230
NCBI entrez gene - 66042     See in Manteia.
MGI - MGI:1913292
RefSeq - NM_025312
RefSeq Peptide - NP_079588
swissprot - Q9CQN4
Ensembl - ENSMUSG00000036169
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sostdc1aENSDARG00000068892Danio rerio
 ENSGALG00000034685Gallus gallus
 Q6VYA3ENSGALG00000036836Gallus gallus
 Q6X4U4ENSG00000171243Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Sost / sclerostin / Q9BQB4*ENSMUSG0000000149437


Protein motifs (from Interpro)
Interpro ID Name
 IPR006207  Cystine knot, C-terminal
 IPR008835  Sclerostin/Sclerostin domain-containing protein 1
 IPR029034  Cystine-knot cytokine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007389 pattern specification process IMP
 biological_processGO:0010454 negative regulation of cell fate commitment IMP
 biological_processGO:0016055 Wnt signaling pathway IEA
 biological_processGO:0030178 negative regulation of Wnt signaling pathway IEA
 biological_processGO:0030509 BMP signaling pathway IEA
 biological_processGO:0030514 negative regulation of BMP signaling pathway IEA
 biological_processGO:0031069 hair follicle morphogenesis IMP
 biological_processGO:0042475 odontogenesis of dentin-containing tooth IMP
 biological_processGO:0045662 negative regulation of myoblast differentiation IEA
 biological_processGO:0060648 mammary gland bud morphogenesis IMP
 biological_processGO:0090090 negative regulation of canonical Wnt signaling pathway IMP
 biological_processGO:2000016 negative regulation of determination of dorsal identity IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0036122 BMP binding IEA
 molecular_functionGO:0098821 BMP receptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000062 increased bone density "increased mineral content of bone; indicator of bone strength" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:61295]
Show

Allelic Composition: Pdcd1tm1Hon/Pdcd1tm1Hon,Vsirtm1Lex/Vsirtm1Lex,Tg(Tcra2D2,Tcrb2D2)1Kuch/0
Genetic Background: involves: 129S2/SvPas * 129S5/SvEvBrd * C57BL/6

Allelic Composition: Sostdc1tm2Snd/Sostdc1tm2Snd
Genetic Background: involves: 129S/SvEv

 MP:0000088 short mandible "reduced length of the lower bony framework of the mouth where the inferior teeth are held" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Trp53tm4Xu/Trp53tm4Xu
Genetic Background: Not Specified

 MP:0001092 abnormal trigeminal ganglion morphology "malformed group of sensory neuron cell bodies associated with the trigeminal nerve (fifth cranial nerve)" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:33038]
Show

Allelic Composition: Gria1tm5Rlh/Gria1tm5Rlh
Genetic Background: involves: 129 * C57BL/6

 MP:0001661 extended life span "persistence of life for a longer period than is the norm for an organism" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Col4a3tm1Dec/Col4a3tm1Dec
Genetic Background: 129-Col4a3tm1Dec/J

 MP:0002100 abnormal tooth morphology "atypical size, shape or hard tissue structure of the teeth " [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Atf4tm1Kry/Atf4tm1Kry,Tg(Col1a1-cre)1Kry/0
Genetic Background: involves: C57BL/6J * FVB

 MP:0002743 glomerulonephritis "glomerular disease characterized by diffuse inflammatory reaction that is not the acute response to infection of the kidneys" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
Show

Allelic Composition: Col4a3tm1Dec/Col4a3tm1Dec,Sostdc1tm1Myan/Sostdc1tm1Myan
Genetic Background: involves: 129X1/SvJ

 MP:0002871 albuminuria "presence of excess albumin in the urine" [RGD:Rat Genome Database submission, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Col4a3tm1Dec/Col4a3tm1Dec,Sostdc1tm1Myan/Sostdc1tm1Myan
Genetic Background: involves: 129X1/SvJ

 MP:0002896 abnormal bone mineralization "defect in the process by which minerals are deposited into bone" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Pdcd1tm1Hon/Pdcd1tm1Hon,Vsirtm1Lex/Vsirtm1Lex,Tg(Tcra2D2,Tcrb2D2)1Kuch/0
Genetic Background: involves: 129S2/SvPas * 129S5/SvEvBrd * C57BL/6

Allelic Composition: Sostdc1tm2Snd/Sostdc1tm2Snd
Genetic Background: involves: 129S/SvEv

 MP:0003215 renal interstitial fibrosis "formation of fibrous tissue within the interstices of the kidney as a result of repair or a reactive process" [RGD:Rat Genome Database submission]
Show

Allelic Composition: Col4a3tm1Dec/Col4a3tm1Dec,Sostdc1tm1Myan/Sostdc1tm1Myan
Genetic Background: involves: 129X1/SvJ

 MP:0003755 abnormal palate "anomaly in the roof of the mouth in vertebrates formed anteriorly by a bony projection of the upper jaw (hard palate) and posteriorly by the fold of connective tissue (soft palate) " [ncbi:Matthew Mailman, NCBI request]
Show

Allelic Composition: Trp53tm4Xu/Trp53tm4Xu
Genetic Background: Not Specified

 MP:0003756 abnormal hard palate "abnormality in the anterior part of the palate that is supported by and includes the palatal extensions of the maxillary and palatine bones " [ncbi:Matthew Mailman, NCBI request]
Show

Allelic Composition: Trp53tm4Xu/Trp53tm4Xu
Genetic Background: Not Specified

 MP:0003932 abnormal molar crown morphology "defects in the upper part of the molar, which is normally covered with enamel " [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Cdh23v-2J/Cdh23+,Myo7a4626SB/Myo7a+
Genetic Background: mixed

 MP:0004033 supernumerary teeth "occurrence of more than the usual number of teeth" [rbabiuk:Randall Babiuk, Mouse Genome Informatics Curator]
Show

Allelic Composition: Snrpntm2Cbr/Snrpn+
Genetic Background: either: B6.Cg-Snrpntm2Cbr or (involves: 129S1/Sv * C57BL/6J * DBA/2J)

 MP:0004985 decreased osteoclast cell number "reduced number of the bone resorpting cells that remove bone tissue by degrading the mineralized matrix" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Pdcd1tm1Hon/Pdcd1tm1Hon,Vsirtm1Lex/Vsirtm1Lex,Tg(Tcra2D2,Tcrb2D2)1Kuch/0
Genetic Background: involves: 129S2/SvPas * 129S5/SvEvBrd * C57BL/6

 MP:0004988 increased osteoblast cell number "greater than average number of the bone-forming cells, which normally form an osseous matrix (osteoid) in which they become enclosed as an osteocytes" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Pdcd1tm1Hon/Pdcd1tm1Hon,Vsirtm1Lex/Vsirtm1Lex,Tg(Tcra2D2,Tcrb2D2)1Kuch/0
Genetic Background: involves: 129S2/SvPas * 129S5/SvEvBrd * C57BL/6

 MP:0005006 abnormal osteoblast function "anomalous function of this bone-forming cell, which normally forms an osseous matrix in which it becomes enclosed as an osteocyte " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Pdcd1tm1Hon/Pdcd1tm1Hon,Vsirtm1Lex/Vsirtm1Lex,Tg(Tcra2D2,Tcrb2D2)1Kuch/0
Genetic Background: involves: 129S2/SvPas * 129S5/SvEvBrd * C57BL/6

 MP:0005264 glomerulosclerosis "hyaline deposits or scarring within the renal glomeruli, often occurring with renal arteriosclerosis or diabetes" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Col4a3tm1Dec/Col4a3tm1Dec,Sostdc1tm1Myan/Sostdc1tm1Myan
Genetic Background: involves: 129X1/SvJ

 MP:0005553 increased circulating creatinine level "greater than the normal blood concentration of this product of creatine catabolism; abnormal levels indicative of renal dysfunction" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, RGD:Rat Genome Database submission]
Show

Allelic Composition: Col4a3tm1Dec/Col4a3tm1Dec,Sostdc1tm1Myan/Sostdc1tm1Myan
Genetic Background: involves: 129X1/SvJ

 MP:0005565 increased blood urea nitrogen level "high circulating concentration of nitrogen, in the form of urea; commonly used to measure renal function" [RGD:Rat Genome Database submission, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Col4a3tm1Dec/Col4a3tm1Dec,Sostdc1tm1Myan/Sostdc1tm1Myan
Genetic Background: involves: 129X1/SvJ

 MP:0005605 increased bone mass "an increase in the total amount of bone tissue contained in the skeleton" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Pdcd1tm1Hon/Pdcd1tm1Hon,Vsirtm1Lex/Vsirtm1Lex,Tg(Tcra2D2,Tcrb2D2)1Kuch/0
Genetic Background: involves: 129S2/SvPas * 129S5/SvEvBrd * C57BL/6

 MP:0006264 decreased systolic blood pressure "abnormal decrease in the pressure in the arteries as the heart contracts and pumps blood into the arteries" [monikat:Monika Tomczuk, Mouse Genome Informatics Curator, J:21887]
Show

Allelic Composition: Col4a3tm1Dec/Col4a3tm1Dec,Sostdc1tm1Myan/Sostdc1tm1Myan
Genetic Background: involves: 129X1/SvJ

 MP:0006369 supernumerary incisors "more than a pair, top and/or bottom, of the long pointed teeth that are the most anterior and prominent in the jaw" [MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Trp53tm4Xu/Trp53tm4Xu
Genetic Background: Not Specified

Allelic Composition: Sostdc1shk/Sostdc1shk
Genetic Background: involves: C57BL/6J * CAST/EiJ * NOD

 MP:0008271 abnormal bone ossification "any anomaly in the formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance" [GO:0001503]
Show

Allelic Composition: Pdcd1tm1Hon/Pdcd1tm1Hon,Vsirtm1Lex/Vsirtm1Lex,Tg(Tcra2D2,Tcrb2D2)1Kuch/0
Genetic Background: involves: 129S2/SvPas * 129S5/SvEvBrd * C57BL/6

 MP:0008525 decreased skull height "decrease in the distance between the cranial base and the upper domelike portion of the skull" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Trp53tm4Xu/Trp53tm4Xu
Genetic Background: Not Specified

 MP:0008526 decreased skull width "having a decreased side-to-side distance of the skull" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Trp53tm4Xu/Trp53tm4Xu
Genetic Background: Not Specified

 MP:0008874 decreased sensitivity to xenobiotics "increase in the dose or concentration of a foreign compound required to induce a specific level of response" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Snrpntm2Cbr/Snrpn+
Genetic Background: either: B6.Cg-Snrpntm2Cbr or (involves: 129S1/Sv * C57BL/6J * DBA/2J)

 MP:0009652 abnormal palatal rugae "any structural anomaly in the transversal ridges that develop on the secondary (hard) palate" [MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Trp53tm4Xu/Trp53tm4Xu
Genetic Background: Not Specified

 MP:0009767 decreased sensitivity to xenobiotic induced morbidity/mortality "increase in the amount of a foreign compound required to cause death or diseased state" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Snrpntm2Cbr/Snrpn+
Genetic Background: either: B6.Cg-Snrpntm2Cbr or (involves: 129S1/Sv * C57BL/6J * DBA/2J)

 MP:0010123 increased bone mineral content "elevation in the amount (usually in grams/cm) of bone mineral divided by a bone-scanned area" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Pdcd1tm1Hon/Pdcd1tm1Hon,Vsirtm1Lex/Vsirtm1Lex,Tg(Tcra2D2,Tcrb2D2)1Kuch/0
Genetic Background: involves: 129S2/SvPas * 129S5/SvEvBrd * C57BL/6

 MP:0010773 supernumerary molars "increased number of the most posterior teeth located on either side of the jaw, and characterized by a large crown and broad chewing surface" [MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Cdh23v-2J/Cdh23+,Myo7a4626SB/Myo7a+
Genetic Background: mixed

 MP:0010864 abnormal enamel knot morphology "any structural anomaly of a transient cluster of cells in the central part of the dental epithelium facing the dental mesenchyme, which acts as an organizing center, providing positional information for tooth morphogenesis and regulating the growth of tooth cusps" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator", PMID:8808404]
Show

Allelic Composition: Cdh23v-2J/Cdh23+,Myo7a4626SB/Myo7a+
Genetic Background: mixed

 MP:0010878 increased trabecular bone volume "increase in the amount of space occupied by trabecular bone tissue in the skeleton" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Pdcd1tm1Hon/Pdcd1tm1Hon,Vsirtm1Lex/Vsirtm1Lex,Tg(Tcra2D2,Tcrb2D2)1Kuch/0
Genetic Background: involves: 129S2/SvPas * 129S5/SvEvBrd * C57BL/6

 MP:0011088 partial neonatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms within the neonatal period after birth (Mus: P0)" [MGI:csmith]
Show

Allelic Composition: Gria1tm5Rlh/Gria1tm5Rlh
Genetic Background: involves: 129 * C57BL/6

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Rpgrip1ltm1a(EUCOMM)Wtsi/Rpgrip1l+
Genetic Background: C57BL/6N-Rpgrip1ltm1a(EUCOMM)Wtsi/Wtsi

Allelic Composition: Sostdc1tm2Snd/Sostdc1tm2Snd
Genetic Background: involves: 129S/SvEv

 MP:0011346 renal tubule atrophy "acquired diminution of the size of the loops of Henle, the proximal convoluted tubule or the distal convoluted tubule associated with wasting as from death and reabsorbtion of cells, diminished cellular proliferation, decreased cellular volume, pressure, ischemia, malnutrition, reduced function or malfunction, or hormonal changes" [MGI:anna]
Show

Allelic Composition: Col4a3tm1Dec/Col4a3tm1Dec,Sostdc1tm1Myan/Sostdc1tm1Myan
Genetic Background: involves: 129X1/SvJ

 MP:0011372 decreased renal tubule apoptosis "decrease in the number of renal tubule cells undergoing programmed cell death" [MGI:anna]
Show

Allelic Composition: Snrpntm2Cbr/Snrpn+
Genetic Background: either: B6.Cg-Snrpntm2Cbr or (involves: 129S1/Sv * C57BL/6J * DBA/2J)

 MP:0011402 renal cast "any of the various casts formed from gelled protein precipitated in the distal convoluted tubules and collecting ducts of nephrons and molded to the tubular or duct lumen which dislodge and pass into the urine; types named for their constituent material include acellular casts (e.g. granular, hyaline, waxy, or fatty casts) and cellular casts (e.g. red or white blood cell casts)" [MGI:anna]
Show

Allelic Composition: Col4a3tm1Dec/Col4a3tm1Dec,Sostdc1tm1Myan/Sostdc1tm1Myan
Genetic Background: involves: 129X1/SvJ

 MP:0014101 decreased chondrocyte proliferation "decreased amount of multiplication or reproduction of chondrocytes by cell division, resulting in the expansion of their population" [GO:0035988]
Show

Allelic Composition: Pdcd1tm1Hon/Pdcd1tm1Hon,Vsirtm1Lex/Vsirtm1Lex,Tg(Tcra2D2,Tcrb2D2)1Kuch/0
Genetic Background: involves: 129S2/SvPas * 129S5/SvEvBrd * C57BL/6

 MP:0030438 increased osteoblast proliferation "increase in the expansion rate of osteoblasts by cell division; osteoblasts are skeletogenic cells that secrete osteoid, are capable of producing mineralized (hydroxyapatite) matrix, are located adjacent to or within osteoid tissue, and arise from the transformation of a preosteoblast cell" [MGI:anna]
Show

Allelic Composition: Pdcd1tm1Hon/Pdcd1tm1Hon,Vsirtm1Lex/Vsirtm1Lex,Tg(Tcra2D2,Tcrb2D2)1Kuch/0
Genetic Background: involves: 129S2/SvPas * 129S5/SvEvBrd * C57BL/6

 MP:0030457 abnormal molar cusp morphology "any structural anomaly of an elevation or mound on the crown of a molar tooth making up a part of the occlusal (masticatory) surface" [https://medical-dictionary.thefreedictionary.com/cusp+of+tooth, MGI:anna]
Show

Allelic Composition: Cdh23v-2J/Cdh23+,Myo7a4626SB/Myo7a+
Genetic Background: mixed

 MP:0030473 fused molars "union of two adjacent molar teeth in the maxilla and/or mandible" [MGI:anna]
Show

Allelic Composition: Snrpntm2Cbr/Snrpn+
Genetic Background: either: B6.Cg-Snrpntm2Cbr or (involves: 129S1/Sv * C57BL/6J * DBA/2J)

Allelic Composition: Sostdc1tm1Nit/Sostdc1tm1Nit
Genetic Background: involves: 129S1/Sv * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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