ENSMUSG00000037791


Mus musculus

Features
Gene ID: ENSMUSG00000037791
  
Biological name :Phf12
  
Synonyms : PHD finger protein 12 / Phf12 / Q5SPL2
  
Possible biological names infered from orthology : Q96QT6
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B5
Gene start: 77982754
Gene end: 78030539
  
Corresponding Affymetrix probe sets: 10378988 (MoGene1.0st)   1434922_at (Mouse Genome 430 2.0 Array)   1453579_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000131016
Ensembl peptide - ENSMUSP00000044990
Ensembl peptide - ENSMUSP00000103997
Ensembl peptide - ENSMUSP00000119390
Ensembl peptide - ENSMUSP00000127391
Ensembl peptide - ENSMUSP00000130741
NCBI entrez gene - 268448     See in Manteia.
MGI - MGI:1924057
RefSeq - XM_017314564
RefSeq - NM_174852
RefSeq - XM_006533400
RefSeq - XM_006533401
RefSeq Peptide - NP_777277
swissprot - Q3U2C9
swissprot - Q5SPL2
swissprot - Q5SS87
swissprot - F7AXU7
swissprot - F7AKS4
swissprot - F6U3I4
Ensembl - ENSMUSG00000037791
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 phf12aENSDARG00000074303Danio rerio
 phf12bENSDARG00000075509Danio rerio
 PHF12ENSGALG00000031368Gallus gallus
 PHF12ENSG00000109118Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Aire / Q9Z0E3 / Autoimmune regulator / O43918*ENSMUSG000000007319


Protein motifs (from Interpro)
Interpro ID Name
 IPR000253  Forkhead-associated (FHA) domain
 IPR001965  Zinc finger, PHD-type
 IPR008984  SMAD/FHA domain superfamily
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger
 IPR031966  PHD finger protein 12, MRG binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016580 Sin3 complex IEA
 cellular_componentGO:0017053 transcriptional repressor complex IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0001222 transcription corepressor binding IPI
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0003712 transcription coregulator activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0035091 phosphatidylinositol binding IEA
 molecular_functionGO:0042393 histone binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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