ENSMUSG00000038170


Mus musculus

Features
Gene ID: ENSMUSG00000038170
  
Biological name :Pde4dip
  
Synonyms : Pde4dip / phosphodiesterase 4D interacting protein (myomegalin) / Q80YT7
  
Possible biological names infered from orthology : phosphodiesterase 4D interacting protein / Q5VU43
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: F2.2
Gene start: 97689824
Gene end: 97888707
  
Corresponding Affymetrix probe sets: 10500469 (MoGene1.0st)   1417626_at (Mouse Genome 430 2.0 Array)   1433761_at (Mouse Genome 430 2.0 Array)   1456413_at (Mouse Genome 430 2.0 Array)   1460426_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000040905
Ensembl peptide - ENSMUSP00000131170
Ensembl peptide - ENSMUSP00000142941
Ensembl peptide - ENSMUSP00000134832
Ensembl peptide - ENSMUSP00000088254
Ensembl peptide - ENSMUSP00000102653
NCBI entrez gene - 83679     See in Manteia.
MGI - MGI:1891434
RefSeq - NM_178080
RefSeq - NM_001039376
RefSeq - NM_001289701
RefSeq - NM_001289702
RefSeq Peptide - NP_001034465
RefSeq Peptide - NP_001276630
RefSeq Peptide - NP_001276631
RefSeq Peptide - NP_835181
swissprot - Q80YT7
swissprot - G3X9L9
swissprot - H3BJ38
swissprot - A0A0G2JEX6
swissprot - Q3UR03
swissprot - E9Q1A0
Ensembl - ENSMUSG00000038170
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-242b18.1ENSDARG00000054723Danio rerio
 ENSGALG00000036783Gallus gallus
 Q5VU43ENSG00000178104Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8K389 / Cdk5rap2 / CDK5 regulatory subunit-associated protein 2 / Q96SN8*ENSMUSG0000003929818


Protein motifs (from Interpro)
Interpro ID Name
 IPR010630  Neuroblastoma breakpoint family (NBPF) domain
 IPR012943  Centrosomin, N-terminal motif 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034622 cellular protein-containing complex assembly ISS
 biological_processGO:1903358 regulation of Golgi organization ISS
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0005813 centrosome ISS
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0030016 myofibril ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019899 enzyme binding ISS
 molecular_functionGO:0032947 protein-containing complex scaffold activity ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001399 hyperactivity "general restlessness or excessive movement; more frequent movement from one place to another" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409, J:57125]
Show

Allelic Composition: Tektm1.1Vlcg/Tektm1.1Vlcg,Gt(ROSA)26Sortm1(rtTA,EGFP)Nagy/?,Tg(tetO-cre)1Jaw/0
Genetic Background: involves: 129 * C57BL/6NCr

 MP:0002574 increased vertical activity "greater than average time spent jumping or rearing " [J:72576, cwg:Carroll W. Goldsmith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Tektm1.1Vlcg/Tektm1.1Vlcg,Gt(ROSA)26Sortm1(rtTA,EGFP)Nagy/?,Tg(tetO-cre)1Jaw/0
Genetic Background: involves: 129 * C57BL/6NCr

 MP:0010831 partial lethality "the appearance of lower than Mendelian ratios of offspring of a given genotype due to death of some, but not all of the organisms" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Tektm1.1Vlcg/Tektm1.1Vlcg,Gt(ROSA)26Sortm1(rtTA,EGFP)Nagy/?,Tg(tetO-cre)1Jaw/0
Genetic Background: involves: 129 * C57BL/6NCr

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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