Manteia

ENSMUSG00000038299

Mus musculus

Features

Gene ID:	ENSMUSG00000038299

Biological name :	Wdr36

Synonyms :	Wdr36 / WD repeat domain 36

Possible biological names infered from orthology :	Q8NI36

Species:	Mus musculus

Chr. number:	18
Strand:	1
Band:	B1
Gene start:	32837225
Gene end:	32866420

Corresponding Affymetrix probe sets:	10454606 (MoGene1.0st) 1423735_a_at (Mouse Genome 430 2.0 Array) 1451087_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000052465 Ensembl peptide - ENSMUSP00000132189 NCBI entrez gene - 225348 See in Manteia. MGI - MGI:1917819 RefSeq - XM_006525847 RefSeq - NM_001110015 RefSeq - NM_001110016 RefSeq - NM_144863 RefSeq Peptide - NP_001103486 RefSeq Peptide - NP_659112 RefSeq Peptide - NP_001103485 swissprot - Q3TA68 swissprot - Q3TAQ9 Ensembl - ENSMUSG00000038299

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name

Similarity(%)

No match

Protein motifs (from Interpro)

Interpro ID	Name
IPR001680	WD40 repeat
IPR007319	Small-subunit processome, Utp21
IPR011042	Six-bladed beta-propeller, TolB-like
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily
IPR015943	WD40/YVTN repeat-like-containing domain superfamily
IPR017986	WD40-repeat-containing domain
IPR019775	WD40 repeat, conserved site
IPR024977	Anaphase-promoting complex subunit 4, WD40 domain
IPR036322	WD40-repeat-containing domain superfamily

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0001895	retina homeostasis	IMP
biological_process	GO:0006364	rRNA processing	IBA
biological_process	GO:0030516	regulation of axon extension	IMP
cellular_component	GO:0005730	nucleolus	IEA
cellular_component	GO:0032040	small-subunit processome	IBA
cellular_component	GO:0034388	Pwp2p-containing subcomplex of 90S preribosome	IBA
molecular_function	GO:0005515	protein binding	IEA

Pathways (from Reactome)

Pathway description

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
MP:0002663	failure to form blastocele	"developmental anomaly resulting in the absence of the cavity in the blastula of the developing embryo" [cwg:Carroll W. Goldsmith , Mouse Genome Informatics Curator, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:19904]	Show Allelic Composition: Lpar4^tm1Sati/Lpar4^tm1Sati Genetic Background: involves: C57BL/6
MP:0011094	complete embryonic lethality before implantation	"death of all organisms of a given genotype in a population between fertilization and implantation (Mus: E0 to less than E4.5)" [MGI:csmith]	Show Allelic Composition: Lpar4^tm1Sati/Lpar4^tm1Sati Genetic Background: involves: C57BL/6
MP:0011100	complete preweaning lethality	"death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]	Show Allelic Composition: Ube2c^{tm1.1(KOMP)Wtsi}/Ube2c⁺ Genetic Background: C57BL/6N-Ube2c^{tm1.1(KOMP)Wtsi}/J
MP:0013279	increased fasted circulating glucose level	"increase in the amount of glucose in the blood at some defined time point after eating compared to controls" [MGI:Armida_Di_Fenza]	Show Allelic Composition: Tmem79^{tm1.1(KOMP)Wtsi}/Tmem79^{tm1.1(KOMP)Wtsi} Genetic Background: C57BL/6N-Tmem79^{tm1.1(KOMP)Wtsi}/J

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr