ENSMUSG00000038623


Mus musculus

Features
Gene ID: ENSMUSG00000038623
  
Biological name :Tm6sf1
  
Synonyms : P58749 / Tm6sf1 / transmembrane 6 superfamily member 1
  
Possible biological names infered from orthology : Q9BZW5
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: D3
Gene start: 81859001
Gene end: 81884434
  
Corresponding Affymetrix probe sets: 10554574 (MoGene1.0st)   1424443_at (Mouse Genome 430 2.0 Array)   1451353_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000121292
Ensembl peptide - ENSMUSP00000038017
Ensembl peptide - ENSMUSP00000112400
NCBI entrez gene - 107769     See in Manteia.
MGI - MGI:1933209
RefSeq - XM_006540552
RefSeq - NM_001291282
RefSeq - NM_145375
RefSeq - XM_006540551
RefSeq Peptide - NP_001278211
RefSeq Peptide - NP_663350
swissprot - D6RD09
swissprot - P58749
swissprot - D3YX52
Ensembl - ENSMUSG00000038623
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TM6SF1ENSGALG00000006027Gallus gallus
 Q9BZW5ENSG00000136404Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tm6sf2 / transmembrane 6 superfamily member 2 / Q9BZW4*ENSMUSG0000003615148


Protein motifs (from Interpro)
Interpro ID Name
 IPR033118  EXPERA domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr