ENSMUSG00000039100


Mus musculus

Features
Gene ID: ENSMUSG00000039100
  
Biological name :March6
  
Synonyms : E3 ubiquitin-protein ligase MARCH6 / March6 / Q6ZQ89
  
Possible biological names infered from orthology : membrane associated ring-CH-type finger 6 / O60337
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: B2
Gene start: 31455891
Gene end: 31531053
  
Corresponding Affymetrix probe sets: 10428020 (MoGene1.0st)   1433834_at (Mouse Genome 430 2.0 Array)   1445928_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000087694
NCBI entrez gene - 223455     See in Manteia.
MGI - MGI:2442773
RefSeq - NM_172606
RefSeq - XM_011245351
RefSeq Peptide - NP_766194
swissprot - Q6ZQ89
Ensembl - ENSMUSG00000039100
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 march6ENSDARG00000076066Danio rerio
 MARCH6ENSGALG00000035699Gallus gallus
 MARCH6ENSG00000145495Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011016  Zinc finger, RING-CH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010498 proteasomal protein catabolic process IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IBA
 biological_processGO:0070936 protein K48-linked ubiquitination IEA
 cellular_componentGO:0005783 endoplasmic reticulum ISO
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane ISO
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0031624 ubiquitin conjugating enzyme binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:1990381 ubiquitin-specific protease binding IEA


Pathways (from Reactome)
Pathway description
ER Quality Control Compartment (ERQC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr