ENSMUSG00000039209


Mus musculus

Features
Gene ID: ENSMUSG00000039209
  
Biological name :Rpl39l
  
Synonyms : ribosomal protein L39 like / Rpl39l
  
Possible biological names infered from orthology : Q96EH5
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: A1
Gene start: 10170226
Gene end: 10174911
  
Corresponding Affymetrix probe sets: 10433480 (MoGene1.0st)   1423327_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000041794
Ensembl peptide - ENSMUSP00000112791
NCBI entrez gene - 68172     See in Manteia.
MGI - MGI:1915422
RefSeq - XM_006522506
RefSeq - NM_026594
RefSeq Peptide - NP_080870
swissprot - Q9CQD0
Ensembl - ENSMUSG00000039209
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl39ENSDARG00000036316Danio rerio
 RPL39ENSGALG00000008620Gallus gallus
 Q96EH5ENSG00000163923Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rpl39 / P62892 / ribosomal protein L39ENSMUSG0000007964192


Protein motifs (from Interpro)
Interpro ID Name
 IPR000077  Ribosomal protein L39e
 IPR020083  Ribosomal protein L39e, conserved site
 IPR023626  Ribosomal protein L39e domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IBA
 biological_processGO:0007283 spermatogenesis IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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