ENSMUSG00000079641


Mus musculus

Features
Gene ID: ENSMUSG00000079641
  
Biological name :Rpl39
  
Synonyms : P62892 / ribosomal protein L39 / Rpl39
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: A3.3
Gene start: 37082520
Gene end: 37085402
  
Corresponding Affymetrix probe sets: 10427266 (MoGene1.0st)   10604072 (MoGene1.0st)   10604076 (MoGene1.0st)   1423032_at (Mouse Genome 430 2.0 Array)   1450840_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000110886
NCBI entrez gene - 67248     See in Manteia.
MGI - MGI:1914498
RefSeq - NM_026055
RefSeq Peptide - NP_080331
swissprot - P62892
swissprot - Q505A8
Ensembl - ENSMUSG00000079641
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl39ENSDARG00000036316Danio rerio
 RPL39ENSGALG00000008620Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rpl39l / ribosomal protein L39 like / Q96EH5*ENSMUSG0000003920992


Protein motifs (from Interpro)
Interpro ID Name
 IPR000077  Ribosomal protein L39e
 IPR020083  Ribosomal protein L39e, conserved site
 IPR023626  Ribosomal protein L39e domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002227 innate immune response in mucosa ISO
 biological_processGO:0006412 translation IBA
 biological_processGO:0019731 antibacterial humoral response ISO
 biological_processGO:0050830 defense response to Gram-positive bacterium ISO
 biological_processGO:0061844 antimicrobial humoral immune response mediated by antimicrobial peptide ISO
 cellular_componentGO:0005615 extracellular space ISO
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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