ENSMUSG00000039221


Mus musculus

Features
Gene ID: ENSMUSG00000039221
  
Biological name :Rpl22l1
  
Synonyms : Q9D7S7 / ribosomal protein L22 like 1 / Rpl22l1
  
Possible biological names infered from orthology : Q6P5R6
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: A3
Gene start: 28805436
Gene end: 28807424
  
Corresponding Affymetrix probe sets: 10491191 (MoGene1.0st)   10528474 (MoGene1.0st)   1417126_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000043111
Ensembl peptide - ENSMUSP00000141360
Ensembl peptide - ENSMUSP00000141510
NCBI entrez gene - 68028     See in Manteia.
MGI - MGI:1915278
RefSeq - XM_006535531
RefSeq - NM_001347226
RefSeq - NM_026517
RefSeq Peptide - NP_001334155
RefSeq Peptide - NP_080793
swissprot - Q0VBA4
swissprot - Q9D7S7
swissprot - A0A0A6YW21
Ensembl - ENSMUSG00000039221
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl22l1ENSDARG00000010244Danio rerio
 RPL22L1ENSGALG00000009312Gallus gallus
 Q6P5R6ENSG00000163584Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rpl22 / P67984 / ribosomal protein L22 / P35268*ENSMUSG0000002893673


Protein motifs (from Interpro)
Interpro ID Name
 IPR002671  Ribosomal protein L22e
 IPR028370  60S ribosomal protein L22-like 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001672 abnormal embryogenesis/ development "anomaly in the establishment of the characteristic configuration of the embryonic body" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Amotl2tm1.1Laho/Amotl2+,Tg(Cdh5-cre/ERT2)1Rha/0
Genetic Background: involves: C57BL/6

 MP:0011098 complete embryonic lethality during organogenesis "death of all organisms of a given genotype in a population between embryo turning and the completion of organogenesis (Mus: E9 to less than E14)" [MGI:csmith]
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Allelic Composition: Amotl2tm1.1Laho/Amotl2+,Tg(Cdh5-cre/ERT2)1Rha/0
Genetic Background: involves: C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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