ENSMUSG00000039337


Mus musculus

Features
Gene ID: ENSMUSG00000039337
  
Biological name :Tex19.2
  
Synonyms : Q9D5S1 / testis expressed gene 19.2 / Tex19.2
  
Possible biological names infered from orthology : Q8NA77 / testis expressed 19 / TEX19
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: E2
Gene start: 121116215
Gene end: 121118677
  
Corresponding Affymetrix probe sets: 10394075 (MoGene1.0st)   1460274_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000037027
NCBI entrez gene - 70956     See in Manteia.
MGI - MGI:1918206
RefSeq - NM_027622
RefSeq Peptide - NP_081898
swissprot - B2RUP5
swissprot - Q9D5S1
Ensembl - ENSMUSG00000039337
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TEX19ENSG00000182459Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q99MV2 / Tex19.1 / Testis-expressed protein 19.1 / TEX19* / Q8NA77* / testis expressed 19*ENSMUSG0000003932961


Protein motifs (from Interpro)
Interpro ID Name
 IPR029093  Testis-expressed protein 19


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007140 male meiotic nuclear division IMP
 biological_processGO:0007283 spermatogenesis IMP
 biological_processGO:0010529 negative regulation of transposition ISO
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0051321 meiotic cell cycle IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0034584 piRNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001154 seminiferous tubule degeneration "a retrogressive impairment of function or destruction of the tubules in the testes where spermatogenesis occurs" [J:50844]
Show

Allelic Composition: Tex19.1tm2.2Ics/Tex19.1tm2.2Ics,Tex19.2tm1.2Ics/Tex19.2tm1.2Ics
Genetic Background: involves: 129S2/SvPas * C57BL/6 * SJL

 MP:0001155 arrest of spermatogenesis "block of the process by which spermatogonial stem cells divide and differentiate into spermatozoa" [J:62271]
Show

Allelic Composition: Myh10ehc/Myh10tm2Rsad
Genetic Background: involves: 129S4/SvJae * 129S5/SvEvBrd * 129S7/SvEvBrd * C57BL/6J

 MP:0001925 male infertility "inability of male to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409]
Show

Allelic Composition: Tex19.1tm2.2Ics/Tex19.1tm2.2Ics,Tex19.2tm1.2Ics/Tex19.2tm1.2Ics
Genetic Background: involves: 129S2/SvPas * C57BL/6 * SJL

 MP:0002082 postnatal lethality "premature death anytime after postnatal day 1 to weaning age (3 weeks)" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Myh10ehc/Myh10tm2Rsad
Genetic Background: involves: 129S4/SvJae * 129S5/SvEvBrd * 129S7/SvEvBrd * C57BL/6J

 MP:0004179 transmission ratio distortion "the occurence of an allele or haplotype in the offspring of an organism at skewed Mendelian ratios" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Tex19.1tm2.2Ics/Tex19.1tm2.2Ics,Tex19.2tm1.2Ics/Tex19.2tm1.2Ics
Genetic Background: involves: 129S2/SvPas * C57BL/6 * SJL

 MP:0004852 decreased testis weight "reduced average weight of the male reproductive glands" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Tex19.1tm2.2Ics/Tex19.1tm2.2Ics,Tex19.2tm1.2Ics/Tex19.2tm1.2Ics
Genetic Background: involves: 129S2/SvPas * C57BL/6 * SJL

 MP:0005159 azoospermia "absence of living spermatozoa " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tex19.1tm2.2Ics/Tex19.1tm2.2Ics,Tex19.2tm1.2Ics/Tex19.2tm1.2Ics
Genetic Background: involves: 129S2/SvPas * C57BL/6 * SJL

 MP:0008261 arrest of male meiosis "cessation of the progression of the process of nuclear division that results in sperm with one half the normal chromosome number of the original cell" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Tex19.1tm2.2Ics/Tex19.1tm2.2Ics,Tex19.2tm1.2Ics/Tex19.2tm1.2Ics
Genetic Background: involves: 129S2/SvPas * C57BL/6 * SJL

 MP:0009452 abnormal synaptonemal complex "an anomaly in the formation of the proteinaceous structure involved in the pairing of homologous chromosomes during first prophase of meiosis" [MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Tex19.1tm2.2Ics/Tex19.1tm2.2Ics,Tex19.2tm1.2Ics/Tex19.2tm1.2Ics
Genetic Background: involves: 129S2/SvPas * C57BL/6 * SJL

 MP:0013600 testis degeneration "a retrogressive impairment of function or destruction of either or both of the male reproductive glands" [MGI:Anna]
Show

Allelic Composition: Tex19.1tm2.2Ics/Tex19.1tm2.2Ics,Tex19.2tm1.2Ics/Tex19.2tm1.2Ics
Genetic Background: involves: 129S2/SvPas * C57BL/6 * SJL

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr