ENSMUSG00000040429


Mus musculus

Features
Gene ID: ENSMUSG00000040429
  
Biological name :Mterf1a
  
Synonyms : Mterf1a / Q8CHZ9 / Transcription termination factor 1a, mitochondrial
  
Possible biological names infered from orthology : mitochondrial transcription termination factor 1 / MTERF1 / Q99551
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: A1
Gene start: 3890581
Gene end: 3893933
  
Corresponding Affymetrix probe sets: 10519472 (MoGene1.0st)   10527918 (MoGene1.0st)   1429698_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000046017
Ensembl peptide - ENSMUSP00000113306
NCBI entrez gene - 545725     See in Manteia.
MGI - MGI:1918240
RefSeq - XM_017321000
RefSeq - NM_001013023
RefSeq - NM_172135
RefSeq - XM_017320999
RefSeq Peptide - NP_001013041
RefSeq Peptide - NP_742147
swissprot - Q8CHZ9
Ensembl - ENSMUSG00000040429
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MTERF1ENSDARG00000086107Danio rerio
 MTERF1ENSG00000127989Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Mterf1b / MTERF1* / Q99551* / mitochondrial transcription termination factor 1*ENSMUSG0000005317899
Mterf2 / Q8BKY8 / Transcription termination factor 2, mitochondrial / Q49AM1* / mitochondrial transcription termination factor 2*ENSMUSG0000004903824


Protein motifs (from Interpro)
Interpro ID Name
 IPR003690  Transcription termination factor, mitochondrial/chloroplastic


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006353 DNA-templated transcription, termination ISS
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006393 termination of mitochondrial transcription ISS
 biological_processGO:0032392 DNA geometric change ISS
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0005759 mitochondrial matrix IBA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0042645 mitochondrial nucleoid ISO
 molecular_functionGO:0003676 nucleic acid binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003690 double-stranded DNA binding ISS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Mitochondrial transcription termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005621 abnormal cell physiology "aberration in the vital processes of the cell " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, hdene:Howard Dene , Mouse Genome Informatics Curator]
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Allelic Composition: Ttll5tm1.1N/Ttll5tm1.1N
Genetic Background: B6.Cg-Ttll5tm1.1N

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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