ENSMUSG00000040536


Mus musculus

Features
Gene ID: ENSMUSG00000040536
  
Biological name :Necab1
  
Synonyms : Necab1 / N-terminal EF-hand calcium-binding protein 1 / Q8BG18
  
Possible biological names infered from orthology : Q8N987
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: A2
Gene start: 14952245
Gene end: 15149794
  
Corresponding Affymetrix probe sets: 10511665 (MoGene1.0st)   1437156_at (Mouse Genome 430 2.0 Array)   1457142_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000038165
Ensembl peptide - ENSMUSP00000103908
NCBI entrez gene - 69352     See in Manteia.
MGI - MGI:1916602
RefSeq - XM_006538234
RefSeq - NM_178617
RefSeq Peptide - NP_848732
swissprot - Q8BG18
Ensembl - ENSMUSG00000040536
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 necab1ENSDARG00000056566Danio rerio
 NECAB1ENSGALG00000029509Gallus gallus
 NECAB1ENSG00000123119Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Necab3 / Q9D6J4 / N-terminal EF-hand calcium-binding protein 3 / Q96P71*ENSMUSG0000002748947
Necab2 / Q91ZP9 / N-terminal EF-hand calcium-binding protein 2 / Q7Z6G3*ENSMUSG0000003183741


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR007138  Antibiotic biosynthesis monooxygenase domain
 IPR011008  Dimeric alpha-beta barrel
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISO
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr