ENSMUSG00000040550


Mus musculus

Features
Gene ID: ENSMUSG00000040550
  
Biological name :Otud6b
  
Synonyms : Otud6b / OTU domain containing 6B
  
Possible biological names infered from orthology : Q8N6M0
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: A1
Gene start: 14809498
Gene end: 14826587
  
Corresponding Affymetrix probe sets: 10511661 (MoGene1.0st)   1428277_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000113553
Ensembl peptide - ENSMUSP00000120430
NCBI entrez gene - 72201     See in Manteia.
MGI - MGI:1919451
RefSeq - NM_152812
RefSeq Peptide - NP_690025
swissprot - F6VDQ9
swissprot - A0A0A0MQF5
Ensembl - ENSMUSG00000040550
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 otud6bENSDARG00000102705Danio rerio
 OTUD6BENSGALG00000041337Gallus gallus
 OTUD6BENSG00000155100Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Otud6a / Q6IE21 / OTU domain-containing protein 6A / Q7L8S5* / OTU deubiquitinase 6A*ENSMUSG0000005158245


Protein motifs (from Interpro)
Interpro ID Name
 IPR003323  OTU domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0004200 reduced fetal size "smaller proportions of a fetus compared to littermates (sensu Mus: from E14 through birth)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Bloc1s2tm1Wli/Bloc1s2tm1Wli
Genetic Background: involves: 129 * C57BL/6J

 MP:0010402 ventricular septal defect "abnormal communications between the two lower chambers of the heart, including such defects in the perimembranous, inlet, outlet (infundibular), central muscular, marginal muscular, or apical muscular regions" [MESH:C14.240.400.560.540]
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Allelic Composition: Bloc1s2tm1Wli/Bloc1s2tm1Wli
Genetic Background: involves: 129 * C57BL/6J

 MP:0011089 complete perinatal lethality "death of all organisms of a given genotype in a population within the perinatal period (Mus: E18.5 through postnatal day 1)" [MGI:csmith]
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Allelic Composition: Bloc1s2tm1Wli/Bloc1s2tm1Wli
Genetic Background: involves: 129 * C57BL/6J

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Otub1tm1b(EUCOMM)Hmgu/Otub1tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Otub1tm1b(EUCOMM)Hmgu/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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