ENSMUSG00000042097


Mus musculus

Features
Gene ID: ENSMUSG00000042097
  
Biological name :Zfp239
  
Synonyms : P24399 / Zfp239 / zinc finger protein 239
  
Possible biological names infered from orthology : Q16600 / ZNF239
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: F1
Gene start: 117862100
Gene end: 117873291
  
Corresponding Affymetrix probe sets: 10541098 (MoGene1.0st)   1416586_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000078374
Ensembl peptide - ENSMUSP00000128270
NCBI entrez gene - 22685     See in Manteia.
MGI - MGI:1306812
RefSeq - NM_001001792
RefSeq - NM_008616
RefSeq Peptide - NP_001001792
RefSeq Peptide - NP_032642
swissprot - P24399
Ensembl - ENSMUSG00000042097
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 znf993ENSDARG00000110787Danio rerio
 Q16600ENSG00000196793Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q0VAW7 / Zfp112 / zinc finger protein 112 / Q9UJU3* / ZNF112*ENSMUSG0000005267552
Zfp61 / zinc finger protein 61 / A6NK53* / ZNF233* / zinc finger protein 233*ENSMUSG0000005060551
Zfp235 / zinc finger protein 235 / Q14590* / ZNF235*ENSMUSG0000004760351
Zfp94 / zinc finger protein 94 / ZNF45* / Q02386* / zinc finger protein 45*ENSMUSG0000007428250
Zfp111 / zinc finger protein 111ENSMUSG0000008759849
Zfp93 / Q61116 / zinc finger protein 93ENSMUSG0000005530549
Zfp109 / zinc finger protein 109ENSMUSG0000007428348
Zfp108 / zinc finger protein 108ENSMUSG0000003048648
Zfp114 / zinc finger protein 114ENSMUSG0000006896244
Zfp664 / zinc finger protein 664 / Q8N3J9* / ZNF664*ENSMUSG0000007921532


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISO
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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