ENSG00000196793


Homo sapiens

Features
Gene ID: ENSG00000196793
  
Biological name :ZNF239
  
Synonyms : Q16600 / zinc finger protein 239 / ZNF239
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: q11.21
Gene start: 43556344
Gene end: 43574618
  
Corresponding Affymetrix probe sets: 206261_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000307774
Ensembl peptide - ENSP00000363569
Ensembl peptide - ENSP00000398202
Ensembl peptide - ENSP00000443907
NCBI entrez gene - 8187     See in Manteia.
OMIM - 601069
RefSeq - NM_001324349
RefSeq - NM_001324350
RefSeq - NM_001324351
RefSeq - NM_001324352
RefSeq - NM_001324353
RefSeq - NM_005674
RefSeq - XM_011540238
RefSeq - NM_001099282
RefSeq - NM_001099283
RefSeq - NM_001099284
RefSeq - NM_001324347
RefSeq - NM_001324348
RefSeq - XM_005271832
RefSeq - XM_006718003
RefSeq - XM_011540234
RefSeq Peptide - NP_001311276
RefSeq Peptide - NP_001311278
RefSeq Peptide - NP_001311279
RefSeq Peptide - NP_001311280
RefSeq Peptide - NP_001311281
RefSeq Peptide - NP_001311282
RefSeq Peptide - NP_005665
RefSeq Peptide - NP_001311277
RefSeq Peptide - NP_001092752
RefSeq Peptide - NP_001092753
RefSeq Peptide - NP_001092754
swissprot - Q16600
Ensembl - ENSG00000196793
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 znf993ENSDARG00000110787Danio rerio
 P24399ENSMUSG00000042097Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9UL59 / ZNF214 / zinc finger protein 214ENSG0000014905050
Q9UJW7 / ZNF229 / zinc finger protein 229ENSG0000027831846
Q9UJU3 / ZNF112 / zinc finger protein 112ENSG0000006237044
Q14590 / ZNF235 / zinc finger protein 235ENSG0000015991744
Q86WZ6 / ZNF227 / zinc finger protein 227ENSG0000013111543
Q9NYT6 / ZNF226 / zinc finger protein 226ENSG0000016738043
ZNF45 / Q02386 / zinc finger protein 45ENSG0000012445943
Q96NJ3 / ZNF285 / zinc finger protein 285ENSG0000026750841
Q14588 / ZNF234 / zinc finger protein 234ENSG0000026300240
Q9UK10 / ZNF225 / zinc finger protein 225ENSG0000025629437
A6NK53 / ZNF233 / zinc finger protein 233ENSG0000015991536
Q9NZL3 / ZNF224 / zinc finger protein 224ENSG0000026768036
ZNF221 / zinc finger protein 221ENSG0000015990532
Q2VY69 / ZNF284 / zinc finger protein 284ENSG0000018602632
Q12901 / ZNF155 / zinc finger protein 155ENSG0000020492026
Q8N3J9 / ZNF664 / zinc finger protein 664ENSG0000017919522
AC067968.1ENSG0000026702221
Q9UK11 / ZNF223 / zinc finger protein 223ENSG0000017838621
Q9UIE0 / ZNF230 / zinc finger protein 230ENSG0000015988220
Q9UK12 / ZNF222 / zinc finger protein 222ENSG0000015988519


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IMP
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IMP
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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