ENSMUSG00000042364


Mus musculus

Features
Gene ID: ENSMUSG00000042364
  
Biological name :Snx18
  
Synonyms : Snx18 / sorting nexin 18
  
Possible biological names infered from orthology : Q96RF0
  
Species: Mus musculus
  
Chr. number: 13
Strand: -1
Band: D2.2
Gene start: 113592179
Gene end: 113618564
  
Corresponding Affymetrix probe sets: 10412227 (MoGene1.0st)   1416359_at (Mouse Genome 430 2.0 Array)   1416360_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000104864
NCBI entrez gene - 170625     See in Manteia.
MGI - MGI:2137642
RefSeq - NM_130796
RefSeq Peptide - NP_570614
swissprot - Q8C788
Ensembl - ENSMUSG00000042364
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx18aENSDARG00000067713Danio rerio
 snx18bENSDARG00000044246Danio rerio
 SNX18ENSGALG00000014914Gallus gallus
 SNX18ENSG00000178996Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Snx33 / Q4VAA7 / Sorting nexin-33 / Q8WV41*ENSMUSG0000003273349
Snx9 / Q91VH2 / sorting nexin 9 / Q9Y5X1*ENSMUSG0000000236533


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001683  Phox homologous domain
 IPR014536  Sorting nexin 9 family
 IPR019497  Sorting nexin protein, WASP-binding domain
 IPR027267  AH/BAR domain superfamily
 IPR035557  Sorting nexin-18, SH3 domain
 IPR035703  SNX18, PX domain
 IPR036028  SH3-like domain superfamily
 IPR036871  PX domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000278 mitotic cell cycle IEA
 biological_processGO:0000281 mitotic cytokinesis IEA
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016197 endosomal transport IEA
 biological_processGO:0036089 cleavage furrow formation IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030136 clathrin-coated vesicle IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031234 extrinsic component of cytoplasmic side of plasma membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0070062 extracellular exosome IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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