ENSMUSG00000044763


Mus musculus

Features
Gene ID: ENSMUSG00000044763
  
Biological name :Trmt10c
  
Synonyms : Q3UFY8 / Trmt10c / tRNA methyltransferase 10 homolog C
  
Possible biological names infered from orthology : Q7L0Y3 / tRNA methyltransferase 10C, mitochondrial RNase P subunit
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: C1.1
Gene start: 56032609
Gene end: 56037819
  
Corresponding Affymetrix probe sets: 10439985 (MoGene1.0st)   1424333_at (Mouse Genome 430 2.0 Array)   1442716_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000058954
NCBI entrez gene - 52575     See in Manteia.
MGI - MGI:1196261
RefSeq - NM_029092
RefSeq Peptide - NP_083368
swissprot - Q3UFY8
Ensembl - ENSMUSG00000044763
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trmt10cENSDARG00000041575Danio rerio
 TRMT10CENSGALG00000015328Gallus gallus
 Q7L0Y3ENSG00000174173Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9D075 / Trmt10b / tRNA methyltransferase 10 homolog B / Q6PF06* / tRNA methyltransferase 10B*ENSMUSG0000003560117
Trmt10a / tRNA methyltransferase 10A / Q8TBZ6*ENSMUSG0000000412716


Protein motifs (from Interpro)
Interpro ID Name
 IPR007356  tRNA (guanine-N1-)-methyltransferase, eukaryotic
 IPR016009  tRNA methyltransferase TRMD/TRM10-type domain
 IPR025812  tRNA methyltransferase 10 homologue C
 IPR028564  tRNA methyltransferase TRM10-type domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000964 mitochondrial RNA 5"-end processing IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0070131 positive regulation of mitochondrial translation IEA
 biological_processGO:0080009 mRNA methylation IEA
 biological_processGO:0090646 mitochondrial tRNA processing IEA
 biological_processGO:0097745 mitochondrial tRNA 5"-end processing IEA
 biological_processGO:1990180 mitochondrial tRNA 3"-end processing IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0042645 mitochondrial nucleoid IEA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0009019 tRNA (guanine-N1-)-methyltransferase activity IEA
 molecular_functionGO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0052905 tRNA (guanine(9)-N(1))-methyltransferase activity IEA
 molecular_functionGO:0061953 mRNA (adenine-N1-)-methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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