ENSMUSG00000047215


Mus musculus

Features
Gene ID: ENSMUSG00000047215
  
Biological name :Rpl9
  
Synonyms : P51410 / ribosomal protein L9 / Rpl9
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: C3.1
Gene start: 65388364
Gene end: 65391444
  
Corresponding Affymetrix probe sets: 10389229 (MoGene1.0st)   10405890 (MoGene1.0st)   10410506 (MoGene1.0st)   10439402 (MoGene1.0st)   10467088 (MoGene1.0st)   10472686 (MoGene1.0st)   10489049 (MoGene1.0st)   10530194 (MoGene1.0st)   1416420_a_at (Mouse Genome 430 2.0 Array)   1436798_at (Mouse Genome 430 2.0 Array)   1443843_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000113391
Ensembl peptide - ENSMUSP00000143264
Ensembl peptide - ENSMUSP00000142883
Ensembl peptide - ENSMUSP00000115577
Ensembl peptide - ENSMUSP00000113704
Ensembl peptide - ENSMUSP00000109399
NCBI entrez gene - 20005     See in Manteia.
MGI - MGI:1298373
RefSeq - NM_011292
RefSeq Peptide - NP_035422
swissprot - A0A0G2JES3
swissprot - P51410
swissprot - D3Z629
swissprot - Q5EBQ6
swissprot - D3YZT0
swissprot - A0A0G2JFQ3
Ensembl - ENSMUSG00000047215
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR759875.5ENSDARG00000116939Danio rerio
 RPL9ENSGALG00000000150Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rpl9-ps6ENSMUSG0000006245699
Rpl9-ps1ENSMUSG0000008190684


Protein motifs (from Interpro)
Interpro ID Name
 IPR000702  Ribosomal protein L6
 IPR002359  Ribosomal protein L6, conserved site-2
 IPR020040  Ribosomal protein L6, alpha-beta domain
 IPR036789  Ribosomal protein L6, alpha-beta domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006412 translation IC
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IDA
 cellular_componentGO:0031012 extracellular matrix ISO
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IC
 molecular_functionGO:0019843 rRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr