ENSMUSG00000047878


Mus musculus

Features
Gene ID: ENSMUSG00000047878
  
Biological name :A4galt
  
Synonyms : A4galt / alpha 1,4-galactosyltransferase / Q67BJ4
  
Possible biological names infered from orthology : alpha 1,4-galactosyltransferase (P blood group) / Q9NPC4
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: E1
Gene start: 83226722
Gene end: 83251774
  
Corresponding Affymetrix probe sets: 10430968 (MoGene1.0st)   1455338_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000057999
Ensembl peptide - ENSMUSP00000129719
Ensembl peptide - ENSMUSP00000155672
NCBI entrez gene - 239559     See in Manteia.
MGI - MGI:3512453
RefSeq - NM_001004150
RefSeq - NM_001170954
RefSeq Peptide - NP_001004150
RefSeq Peptide - NP_001164425
swissprot - Q3UF00
swissprot - Q67BJ4
Ensembl - ENSMUSG00000047878
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A4GALTENSGALG00000014128Gallus gallus
 A4GALTENSG00000128274Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A4gnt / Q14BT6 / alpha-1,4-N-acetylglucosaminyltransferase / Q9UNA3*ENSMUSG0000003795330


Protein motifs (from Interpro)
Interpro ID Name
 IPR007577  Glycosyltransferase, DXD sugar-binding motif
 IPR007652  Alpha 1,4-glycosyltransferase domain
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001576 globoside biosynthetic process IMP
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0007009 plasma membrane organization ISO
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane ISO
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008378 galactosyltransferase activity ISO
 molecular_functionGO:0015643 toxic substance binding IMP
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0050512 lactosylceramide 4-alpha-galactosyltransferase activity IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0008874 decreased sensitivity to xenobiotics "increase in the dose or concentration of a foreign compound required to induce a specific level of response" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Runx1tm1.1Medv/Runx1tm1.1Medv
Genetic Background: involves: 129P2/OlaHsd

 MP:0009747 impaired behavioral response to xenobiotic "decreased sensitivity to a foreign compound capable of inducing the appearance of behavioral response, such as consumption preference, induced hyperactivity or stereotypic behavior, or increased dosage threshold for the appearance of the behavioral response" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Runx1tm1.1Medv/Runx1tm1.1Medv
Genetic Background: involves: 129P2/OlaHsd

 MP:0009767 decreased sensitivity to xenobiotic induced morbidity/mortality "increase in the amount of a foreign compound required to cause death or diseased state" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Runx1tm1.1Medv/Runx1tm1.1Medv
Genetic Background: involves: 129P2/OlaHsd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr