ENSMUSG00000048616


Mus musculus

Features
Gene ID: ENSMUSG00000048616
  
Biological name :Nog
  
Synonyms : Nog / Noggin / P97466
  
Possible biological names infered from orthology : Q13253
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: C
Gene start: 89300638
Gene end: 89302332
  
Corresponding Affymetrix probe sets: 10389752 (MoGene1.0st)   1422300_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000061427
NCBI entrez gene - 18121     See in Manteia.
MGI - MGI:104327
RefSeq - NM_008711
RefSeq Peptide - NP_032737
swissprot - A2RTJ4
swissprot - P97466
Ensembl - ENSMUSG00000048616
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nog1ENSDARG00000058819Danio rerio
 nog3ENSDARG00000053528Danio rerio
 NOGENSGALG00000003114Gallus gallus
 NOGENSG00000183691Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008717  Noggin
 IPR029034  Cystine-knot cytokine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IMP
 biological_processGO:0001501 skeletal system development IMP
 biological_processGO:0001649 osteoblast differentiation IMP
 biological_processGO:0001655 urogenital system development IMP
 biological_processGO:0001657 ureteric bud development IDA
 biological_processGO:0001701 in utero embryonic development IMP
 biological_processGO:0001706 endoderm formation IDA
 biological_processGO:0001707 mesoderm formation IDA
 biological_processGO:0001837 epithelial to mesenchymal transition IMP
 biological_processGO:0001839 neural plate morphogenesis IMP
 biological_processGO:0001843 neural tube closure IMP
 biological_processGO:0003149 membranous septum morphogenesis IMP
 biological_processGO:0003151 outflow tract morphogenesis IMP
 biological_processGO:0003203 endocardial cushion morphogenesis IMP
 biological_processGO:0003223 ventricular compact myocardium morphogenesis IMP
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007389 pattern specification process IMP
 biological_processGO:0007411 axon guidance IMP
 biological_processGO:0007417 central nervous system development IMP
 biological_processGO:0007420 brain development IMP
 biological_processGO:0007492 endoderm development IDA
 biological_processGO:0008045 motor neuron axon guidance IMP
 biological_processGO:0009953 dorsal/ventral pattern formation ISO
 biological_processGO:0010628 positive regulation of gene expression IMP
 biological_processGO:0010629 negative regulation of gene expression IDA
 biological_processGO:0021510 spinal cord development IMP
 biological_processGO:0021533 cell differentiation in hindbrain ISO
 biological_processGO:0021915 neural tube development IMP
 biological_processGO:0021983 pituitary gland development IMP
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030336 negative regulation of cell migration IEA
 biological_processGO:0030509 BMP signaling pathway IDA
 biological_processGO:0030510 regulation of BMP signaling pathway IMP
 biological_processGO:0030514 negative regulation of BMP signaling pathway ISO
 biological_processGO:0035019 somatic stem cell population maintenance IEA
 biological_processGO:0042060 wound healing IMP
 biological_processGO:0042474 middle ear morphogenesis ISO
 biological_processGO:0042733 embryonic digit morphogenesis ISO
 biological_processGO:0045596 negative regulation of cell differentiation IEA
 biological_processGO:0045668 negative regulation of osteoblast differentiation ISO
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IGI
 biological_processGO:0048318 axial mesoderm development IMP
 biological_processGO:0048570 notochord morphogenesis IMP
 biological_processGO:0048646 anatomical structure formation involved in morphogenesis IMP
 biological_processGO:0048706 embryonic skeletal system development IEA
 biological_processGO:0048712 negative regulation of astrocyte differentiation IMP
 biological_processGO:0048762 mesenchymal cell differentiation IMP
 biological_processGO:0050679 positive regulation of epithelial cell proliferation IMP
 biological_processGO:0051216 cartilage development IEA
 biological_processGO:0055009 atrial cardiac muscle tissue morphogenesis IMP
 biological_processGO:0060044 negative regulation of cardiac muscle cell proliferation IMP
 biological_processGO:0060173 limb development IEA
 biological_processGO:0060272 embryonic skeletal joint morphogenesis ISO
 biological_processGO:0060302 negative regulation of cytokine activity ISO
 biological_processGO:0060325 face morphogenesis IMP
 biological_processGO:0060394 negative regulation of pathway-restricted SMAD protein phosphorylation IMP
 biological_processGO:0060412 ventricular septum morphogenesis IMP
 biological_processGO:0060425 lung morphogenesis IMP
 biological_processGO:0060513 prostatic bud formation IMP
 biological_processGO:0060676 ureteric bud formation IDA
 biological_processGO:0060825 fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation ISO
 biological_processGO:0061037 negative regulation of cartilage development IDA
 biological_processGO:0061053 somite development IMP
 biological_processGO:0061312 BMP signaling pathway involved in heart development IMP
 biological_processGO:0061384 heart trabecula morphogenesis IMP
 biological_processGO:0061626 pharyngeal arch artery morphogenesis IMP
 biological_processGO:0071773 cellular response to BMP stimulus IDA
 biological_processGO:0090090 negative regulation of canonical Wnt signaling pathway IEA
 biological_processGO:0090190 positive regulation of branching involved in ureteric bud morphogenesis IDA
 biological_processGO:0090193 positive regulation of glomerulus development IDA
 biological_processGO:1905006 negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation IMP
 biological_processGO:2000313 regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation ISO
 biological_processGO:2001234 negative regulation of apoptotic signaling pathway IMP
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0019955 cytokine binding ISO
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
Signaling by BMP


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000029 abnormal malleus morphology "structural anomaly in the largest of the three auditory ossicles, which resembles a club or hammer " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

 MP:0000031 abnormal cochlea morphology "any anomaly, deformity, malformation, impairment or dysfunction of the cochlea" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, cml:Cathleen M. Lutz , Mouse Genome Informatics Curator, J:21484]
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Allelic Composition: Trp53tm1Brd/Trp53tm1Brd,Tg(Lck-cre)1Cwi/0
Genetic Background: involves: 129S7/SvEvBrd

 MP:0000049 abnormal middle ear morphology "malformation or malfunction of any components of the tympanic cavity or its ossicles" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

 MP:0000077 abnormal interparietal bone morphology "malformed bone of the cranium; lies above and anterior to the occipital bone " [J:61509]
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Allelic Composition: Cer1tm1Belo/Cer1tm1Belo,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0000087 absent mandible "missing the lower bony framework of the mouth where the inferior teeth are held" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Cdkn2dtm1Maro/Cdkn2dtm1Maro
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0000107 abnormal frontal bone morphology "malformed bone forming the forehead and part of the eye orbit" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:17489]
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Allelic Composition: Cer1tm1Belo/Cer1tm1Belo,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0000109 abnormal parietal bone morphology "malformed curved bone forming part of the vault of the cranium" [J:17489]
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Allelic Composition: Cer1tm1Belo/Cer1tm1Belo,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0000137 abnormal vertebrae morphology "malformed bony segment of the spinal column" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Nogtm1.1Rmh/Nogtm1.1Rmh,Tmem163Tg(ACTB-cre)2Mrt/0
Genetic Background: involves: 129P2/OlaHsd * C57BL/6 * FVB/N * SJL

 MP:0000150 abnormal rib morphology "malformed bones forming the bony wall of the chest" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:50311]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

Allelic Composition: Nogtm1Amc/Nog+
Genetic Background: B6.129S1-Nogtm1Amc

Allelic Composition: Nogtm1Amc/Nog+
Genetic Background: involves: 129S1/Sv * CD-1

Allelic Composition: Nogtm1.1Rmh/Nogtm1.1Rmh,Tmem163Tg(ACTB-cre)2Mrt/0
Genetic Background: involves: 129P2/OlaHsd * C57BL/6 * FVB/N * SJL

 MP:0000160 kyphosis "forward curvature of the spine, characterized by extensive flexion. " [J:62023, J:66943, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, cml:Cathleen M. Lutz , Mouse Genome Informatics Curator]
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Allelic Composition: Nogtm1Amc/Nog+
Genetic Background: involves: 129S1/Sv * CD-1

 MP:0000163 abnormal cartilage morphology "anomalous structure or development of the nonvascular, resilient, flexible connective tissue found primarily in joints, walls of the throax, and tubular structures, but which also comprises most of the skeleton in early fetal life " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Srgap3tm1.1Ssod/Srgap3+,Tg(Thy1-EGFP)#Jrs/0
Genetic Background: involves: C57BL/6J * CBA

 MP:0000164 abnormal cartilage development "anomalous formation of the nonvascular, resilient, flexible connective tissue found primarily in joints, walls of the throax, and tubular structures, but which also comprises most of the skeleton in early fetal life " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Srgap3tm1.1Ssod/Srgap3+,Tg(Thy1-EGFP)#Jrs/0
Genetic Background: involves: C57BL/6J * CBA

 MP:0000428 abnormal craniofacial morphology "anomalous structure or development of the face and/or cranium" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Pde6brd1/Pde6brgsc1754
Genetic Background: involves: C3H * C57BL/6JJcl

 MP:0000432 abnormal head morphology "anomalous structure or development of the portion of the body containing the brain and organs of sight, hearing, taste, and smell " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Tyrc-46H/Tyrc-46H
Genetic Background: Not Specified

 MP:0000474 abnormal foregut morphology "malformed cephalic portion of the primitive digestive tube of the embryo" [J:35802]
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Allelic Composition: KitlSl-3Neu/Kitl+
Genetic Background: involves: 102/El * C3H/El

 MP:0000537 abnormal urethra morphology "anomalous structure of the canal leading from the bladder, discharging the urine externally" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Postntm1Jmol/Postntm1Jmol
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0000547 short limbs "reduced average length of the extremities" [MGI:CLS, J:61509]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: Cer1tm1Belo/Cer1tm1Belo,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0000585 kinked tail "a sharp bend or zig-zag in the tail" [J:61295]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

Allelic Composition: Nogtm1Amc/Nog+
Genetic Background: B6.129S1-Nogtm1Amc

Allelic Composition: Nogtm1Amc/Nog+
Genetic Background: involves: 129S1/Sv * CD-1

 MP:0000661 small ventral prostate "reduced size of lateral lobe of the prostate" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:63764]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * C57BL/6J * ICR

 MP:0000787 abnormal telencephalon morphology "any malformation or absence of the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived " [MeSH:National Library of Medicine - Medical Subject Headings , 2003, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Cdkn2dtm1Maro/Cdkn2dtm1Maro
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0000830 abnormal diencephalon morphology "any malformation or absence of the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, Principles of Neural Science , 3rd edition:ISBN 0-8385-8034-3]
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Allelic Composition: Cdkn2dtm1Maro/Cdkn2dtm1Maro
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * CD-1) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)

 MP:0000913 abnormal brain development "malformed or incomplete differentiation of the brain" [MGI:cls, J:49840]
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Allelic Composition: Nogtm1.1Rmh/Nogtm1.1Rmh,Tmem163Tg(ACTB-cre)2Mrt/0
Genetic Background: involves: 129P2/OlaHsd * C57BL/6 * FVB/N * SJL

 MP:0000914 exencephaly "neurocranial defects resulting in exposure or extrusion of the brain" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:49840]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * CD-1

Allelic Composition: Cer1tm1Belo/Cer1tm1Belo,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: C57BL/6

 MP:0000928 incomplete cephalic closure "arrest of the fusion of the cephalic neural folds" [J:12622]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * C57BL/6) or (involves: 129S1/Sv * CD-1 * ICR)

 MP:0000929 open neural tube "incomplete invagination and fusion of the neuroepithelial layer in early development" [MGI:CLS, J:53370, J:62571]
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Allelic Composition: Cer1tm1Belo/Cer1tm1Belo,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * C57BL/6) or (involves: 129S1/Sv * CD-1 * ICR)

Allelic Composition: Grem1tm1Ecan/Grem1tm1Ecan,Nogtm1.1Rmh/Nogtm1.1Rmh,Tmem163Tg(ACTB-cre)2Mrt/0
Genetic Background: involves: 129P2/OlaHsd * 129X1/SvJ * C57BL/6 * FVB/N * SJL

Allelic Composition: Grem1tm1Ecan/Grem1+,Nogtm1.1Rmh/Nogtm1.1Rmh,Tmem163Tg(ACTB-cre)2Mrt/0
Genetic Background: involves: 129P2/OlaHsd * 129X1/SvJ * C57BL/6 * FVB/N * SJL

 MP:0000930 wavy neural tube "undulations in the embryonic neural tube" [J:37888]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0000932 absent notochord "missing axial fibrocellular cord in embryos around which develops the vertebral primordia" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:12622]
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Allelic Composition: Cdkn2dtm1Maro/Cdkn2dtm1Maro
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0000955 abnormal spinal cord morphology "malformation or disorganization of the cylindrical tissue of the vertebral canal that extends from the medulla oblongata to the conus medullaris" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0001145 abnormal male reproductive anatomy "anomalous structure of the organs associated with producing offspring in the gender that produces spermatozoa" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Postntm1Jmol/Postntm1Jmol
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0001158 abnormal prostate morphology "mallformed gland in males that secretes part of the seminiferous fluid" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:63764]
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Allelic Composition: Postntm1Jmol/Postntm1Jmol
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0001175 abnormal lung morphology "malformed organ of respiration" [J:35802]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0001176 abnormal lung development "malformation or arrest of differentiation of the organs of respiration" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:54931]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0001286 abnormal eye development "malformation or arrest of differentiation of the visual organ" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:cls, J:49840]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0001293 anophthalmia "congenital absence of all tissues of the eyes" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CML, J:71979]
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Allelic Composition: Cdkn2dtm1Maro/Cdkn2dtm1Maro
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0001688 abnormal somite development "anomalous formation of any of the paired, metamerically arranged cell masses formed in the embryonic paraxial mesoderm" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

Allelic Composition: Grem1tm1Ecan/Grem1tm1Ecan,Nogtm1.1Rmh/Nogtm1.1Rmh,Tmem163Tg(ACTB-cre)2Mrt/0
Genetic Background: involves: 129P2/OlaHsd * 129X1/SvJ * C57BL/6 * FVB/N * SJL

 MP:0001698 reduced embryo size "smaller proportions of embryo compared to littermates" [J:61790]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0001706 abnormal left-right axis patterning "anomaly in the formation or development of the body or a specific organ of the body in relation to the left and right sides of the body or organ" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Cdkn2dtm1Maro/Cdkn2dtm1Maro
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0001785 edema "an accumulation of an excessive amount of watery fluid in cells or intercellular tissues" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:54065]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * CD-1

 MP:0002080 prenatal lethality "death anytime between fertilization and E18.5" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Nrg1tm1Cbm/Nrg1tm3Cbm,Isl2tm1Arbr/Isl2+
Genetic Background: involves: 129P2/OlaHsd * 129S7/SvEvBrd * C57BL/6J

 MP:0002081 perinatal lethality "death anytime between E18.5 and postnatal day 1 " [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * CD-1

 MP:0002085 abnormal embryonic tissue morphology "structural abnormality or development of any embryonic tissue resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nodaltm1Rob/Nodal+
Genetic Background: involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ

Allelic Composition: Nogtm1Amc/Nog+,Smad3tm1Xfw/Smad3+
Genetic Background: involves: 129/Sv * 129S1/Sv

Allelic Composition: Nogtm1Amc/Nog+,Smad3tm1Xfw/Smad3tm1Xfw
Genetic Background: involves: 129/Sv * 129S1/Sv

Allelic Composition: Nogtm1Amc/Nogtm1Amc,Smad3tm1Xfw/Smad3tm1Xfw
Genetic Background: involves: 129/Sv * 129S1/Sv

 MP:0002108 abnormal muscle morphology "abnormal development of muscle tissue resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Nogtm1Amc/Nog+
Genetic Background: B6.129S1-Nogtm1Amc

 MP:0002109 abnormal limb morphology "abnormal development of limbs resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Nogtm1Amc/Nog+
Genetic Background: B6.129S1-Nogtm1Amc

 MP:0002113 abnormal skeleton development "anomalous differentiation or remodeling of bone tissue resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Srgap3tm1.1Ssod/Srgap3+,Tg(Thy1-EGFP)#Jrs/0
Genetic Background: involves: C57BL/6J * CBA

 MP:0002114 abnormal axial skeleton morphology "abnormal development of vertebral, spinal or sternal bones resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: Nogtm1Amc/Nog+
Genetic Background: involves: 129S1/Sv * CD-1

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0002151 abnormal neural tube morphology/development "anomalous structure of or development of the embryonic neural tube resulting in structural anomaly" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: C57BL/6

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * C57BL/6) or (involves: 129S1/Sv * CD-1 * ICR)

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * CD-1) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)

Allelic Composition: Grem1tm1Ecan/Grem1+,Nogtm1.1Rmh/Nogtm1.1Rmh,Tmem163Tg(ACTB-cre)2Mrt/0
Genetic Background: involves: 129P2/OlaHsd * 129X1/SvJ * C57BL/6 * FVB/N * SJL

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Bmp4tm2Blh/Bmp4+,Nogtm1Amc/Nog+
Genetic Background: involves: 129S1/Sv * 129S6/SvEvTac

 MP:0002230 abnormal primitive streak formation "anomaly in the establishment of the midline ridge of embryonic epiblast that later develops into mesoderm and endoderm" [The Atlas of Mouse Development:ISBN 0-12-402035-6, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nodaltm1Rob/Nodal+
Genetic Background: involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ

 MP:0002286 cryptorchism "failure of one or both of the testes to descend into the scrotum around the time of birth" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Postntm1Jmol/Postntm1Jmol
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0002632 vestigial tail "a trace or rudimentary tail structure; the degenerated remains of any tail structure" [pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * CD-1

 MP:0002770 absent bulbourethral gland "missing gland in males that lie along the prostate gland that secrete a fluid component of the seminal fluid into the urethra" [pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator, J:78062]
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Allelic Composition: Postntm1Jmol/Postntm1Jmol
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0002825 abnormal notochord "malformation or absence of the axial fibrocellular cord in embryos around which develops the vertebral primordia" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * C57BL/6) or (involves: 129S1/Sv * CD-1 * ICR)

 MP:0002896 abnormal bone mineralization "defect in the process by which minerals are deposited into bone" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * CD-1

 MP:0003125 abnormal septation of the cloaca "absence of or reduction in the separation of the single opening of the digestive, urinary, and reproductive tracts (cloaca) into mutliple isolated openings during development, may result in hypospadia, reduced anogenital distance, or persistent cloaca" [smb:Susan M. Bello, Mouse Genome Informatics Curator, J:91491]
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Allelic Composition: Postntm1Jmol/Postntm1Jmol
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0003130 anal atresia "absence of a connection between the anal pit and the rectum" [smb:Susan M. Bello, Mouse Genome Informatics Curator, J:91491]
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Allelic Composition: Postntm1Jmol/Postntm1Jmol
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0003148 reduced cochlear coiling "a reduction in cochlear coiling or number of turns; in wild-type mice, the cochlea most commonly exhibits one and three-fourth turns" [J:56294, anna:Anna Anagnostopoulos, Mouse Genome Informatics Curator]
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Allelic Composition: Trp53tm1Brd/Trp53tm1Brd,Tg(Lck-cre)1Cwi/0
Genetic Background: involves: 129S7/SvEvBrd

 MP:0003160 abnormal esophageal development "aberrant formation of the part of the digestive canal through which food passes from the pharynx to the stomach" [smb:Susan M Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * C57BL/6) or (involves: 129S1/Sv * CD-1 * ICR)

 MP:0003190 fused synovial joints "partial or complete absence of separations containing synovial fluid between bones" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:93028]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

Allelic Composition: Nogtm1Amc/Nog+
Genetic Background: B6.129S1-Nogtm1Amc

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * CD-1

Allelic Composition: Nogtm1Amc/Nog+
Genetic Background: involves: 129S1/Sv * CD-1

 MP:0003232 abnormal forebrain development "anomaly in the formation or patterning of the anterior primitive cerebral vesicle; most rostral of three primary vesicles of the embryonic neural tube" [J:93081, smb:Susan M Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Cdkn2dtm1Maro/Cdkn2dtm1Maro
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0003276 esophageal atresia "congenital blockage or absence of the lumen of the esophagus" [ncbi:Matthew Mailman, NCBI request, MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * C57BL/6) or (involves: 129S1/Sv * CD-1 * ICR)

 MP:0003321 tracheoesophageal fistula "an abnormal passage between the esophagus and the trachea, acquired or congenital, often associated with esophageal atresia" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, ncbi:Matthew Mailman, NCBI request]
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Allelic Composition: Cdkn2dtm1Maro/Cdkn2dtm1Maro
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * C57BL/6) or (involves: 129S1/Sv * CD-1 * ICR)

 MP:0003400 kinked neural tube "twists or kinks in the embryonic neural tube" [J:66514, anna:Anna Anagnostopoulos, Mouse Genome Informatics Curator]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

Allelic Composition: Grem1tm1Ecan/Grem1tm1Ecan,Nogtm1.1Rmh/Nogtm1.1Rmh,Tmem163Tg(ACTB-cre)2Mrt/0
Genetic Background: involves: 129P2/OlaHsd * 129X1/SvJ * C57BL/6 * FVB/N * SJL

 MP:0003456 absent tail "completely lacking the appendage at the caudal end of the vertebral column " [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Cer1tm1Belo/Cer1tm1Belo,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * C57BL/6J * ICR

 MP:0003704 abnormal hair follicle development "anomalous development of the epidermis from which the hair shaft develops " [monikat:Monika Tomczuk, Mouse Genome Informatics Curator]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * CD-1

 MP:0003720 abnormal neural tube closure "abnormal invagination and fusion of the neuroepithelial layer in early development" [monikat:Monika Tomczuk, Mouse Genome Informatics Curator, J:99099]
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Allelic Composition: Cer1tm1Belo/Cer1tm1Belo,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0003740 fusion of middle ear ossicles "union of the three small bones of the middle ear into a single structure " [ncbi:Matthew Mailman, NCBI request]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

 MP:0003743 abnormal facial morphology "anomalous structure or development of the face" [ncbi:Matthew Mailman, NCBI request]
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Allelic Composition: Cdkn2dtm1Maro/Cdkn2dtm1Maro
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0003816 abnormal pituitary gland development "malformation or incomplete differentiation of the compound gland suspended from the base of the hypothalamus, which secretes somatotropins, prolactin, TSH (thyroid-stimulating hormone), gonadotropins, adrenal corticotropin" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:51160]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * CD-1) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)

 MP:0003938 abnormal ear development "developmental anomaly of any of the structures involved in the ear or vestibular system" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0003942 abnormal urinary system development 
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * C57BL/6J * ICR

 MP:0004087 abnormal muscle fiber morphology "malformed or poorly developed muscle fibers, the cylindrical multinucleated muscle cells that contract when stimulated" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * CD-1

 MP:0004200 reduced fetal size "smaller proportions of a fetus compared to littermates (sensu Mus: from E14 through birth)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * CD-1

 MP:0004252 abnormal direction of looping morphogenesis "deviation from the normal rightward direction of cardiac looping" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Pax63Neu/Pax63Neu
Genetic Background: either: (involves: 102 * C3H) or (involves: C3H)

Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL/J

 MP:0004387 abnormal prechordal plate morphology "any structural anomaly of the horseshoe-shaped thickening of the endoderm at the cranial (rostral) end of the primitive streak formed by the involution of Spemann s organizer cells which, together with the notochord, induces the formation of the neural plate from the overlying ectodermal cells and contributes mesodermal type cells to the surrounding tissue" [ISBN:0838580343 "Kandel ER, et al. Principles of Neural Science, 3rd edition"]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc,Smad3tm1Xfw/Smad3+
Genetic Background: involves: 129/Sv * 129S1/Sv

 MP:0004395 increased cochlear inner hair cell number "increased number (or more than the expected single row) of the flask-shaped inner hair sensory cells of the organ of Corti" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Trp53tm1Brd/Trp53tm1Brd,Tg(Lck-cre)1Cwi/0
Genetic Background: involves: 129S7/SvEvBrd

 MP:0004401 increased cochlear outer hair cell number "increased number (or more than the expected 3 rows) of the columnar outer hair sensory cells of the organ of Corti" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Trp53tm1Brd/Trp53tm1Brd,Tg(Lck-cre)1Cwi/0
Genetic Background: involves: 129S7/SvEvBrd

 MP:0004554 small pharynx "reduced size/diameter of the passage between the mouth and the posterior nares and the larynx and esophagus" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL/J

 MP:0004575 small limb buds "reduced size of the mesenchymal outgrowth on the lateral trunk of the embryo that develops into the limbs" [MESH:National Library of Medicine_Medical Subject Headings]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

 MP:0004599 abnormal vertebral arch morphology "any structural anomaly of the dorsal part of a vertebra, consisting of a pair of pedicles, a pair of laminae, and seven processes (four articular processes, two transverse processes, and one spinous process)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

Allelic Composition: Bmp4tm2Blh/Bmp4+,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129S6/SvEvTac

 MP:0004603 absent vertebral arch "loss of the dorsal part of a vertebra, consisting of a pair of pedicles, a pair of laminae, and seven processes (four articular processes, two transverse processes, and one spinous process)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0004616 lumbar vertebral transformation "homeotic transformation of any lumbar vertebrae to adopt the fate of another vertebrae" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Nbl1tm2Rmh/Nbl1tm2Rmh
Genetic Background: either: (involves: 129P2/OlaHsd * 129S6/SvEvTac) or (involves: 129P2/OlaHsd * C57BL/6J)

 MP:0004739 conductive hearing loss "progressive hearing loss due to lesions in the external auditory canal or middle ear" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

 MP:0005105 abnormal middle ear ossicle morphology "anomalous structure or development of the three small bones of the middle ear" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

 MP:0005106 abnormal incus morphology "structural anomaly of the middle of the three auditory ossicles" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:83132]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

 MP:0005107 abnormal stapes morphology "structural anomaly of the smallest and innermost of the three auditory ossicles" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:83132]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

 MP:0005157 holoprosencephaly "presence of a single forebrain hemisphere or lobe; often accompanied by a deficit in median facial development" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:83058]
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Allelic Composition: Cdkn2dtm1Maro/Cdkn2dtm1Maro
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Nogtm1Amc/Nogtm1Amc,Smad3tm1Xfw/Smad3+
Genetic Background: involves: 129/Sv * 129S1/Sv

Allelic Composition: Nogtm1Amc/Nog+,Smad3tm1Xfw/Smad3tm1Xfw
Genetic Background: involves: 129/Sv * 129S1/Sv

Allelic Composition: Nogtm1Amc/Nogtm1Amc,Smad3tm1Xfw/Smad3tm1Xfw
Genetic Background: involves: 129/Sv * 129S1/Sv

 MP:0005163 cyclopia "a congenital defect in which the two orbits are united to form a single cavity containing one eye" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60303]
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Allelic Composition: Cdkn2dtm1Maro/Cdkn2dtm1Maro
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0005225 abnormal vertebrae development "anomalous formation of the vertebrae from the sclerotome" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: C57BL/6

 MP:0005269 abnormal occipital bone morphology "anomalous structure of the bone at the lower, posterior part of the skull" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Cer1tm1Belo/Cer1tm1Belo,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0005297 spina bifida occulta "common congenital midline defect of fusion of the vertebral arch without protrusion of the spinal cord or meninges" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0005315 absent pituitary gland "missing gland that is normally suspended from the base of the hypothalamus and which secretes somatotropins, prolactin, TSH (thyroid-stimulating hormone), gonadotropins, adrenal corticotropin" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:30559]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * CD-1) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)

 MP:0005508 abnormal skeleton morphology "malformation of the bony framework of the body in vertebrates" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: C57BL/6

 MP:0005646 abnormal pituitary gland physiology "anmalous function of this unpaired compound gland suspended from the base of the hypothalamus by a short extension of the infundibulum, the infundibular or pituitary stalk" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * CD-1) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)

 MP:0005650 abnormal limb bud morphology "aberrant structure or development of any of the swellings on the trunk of the embryo that become limbs" [hdene:Howard Dene , Mouse Genome Informatics Curator, MeSH:National Library of Medicine - Medical Subject Headings , 2003, J:61460]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * CD-1

 MP:0005657 abnormal neural plate morphology "malformation or absence of the neuroectodermal area of the embryo s dorsal surface that develops into the neural tube and neural crest" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, hdene:Howard Dene , Mouse Genome Informatics Curator, J:68142]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0006042 increased apoptosis "greater than normal programmed cell death" [RGD:Rat Genome Database submission, smb:Susan M Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0006281 abnormal tail development "anomaly in the formation of the tail" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Grem1tm1Ecan/Grem1tm1Ecan,Nogtm1.1Rmh/Nogtm1.1Rmh,Tmem163Tg(ACTB-cre)2Mrt/0
Genetic Background: involves: 129P2/OlaHsd * 129X1/SvJ * C57BL/6 * FVB/N * SJL

 MP:0006290 proboscis "a long, cylindric protuberance of the face that, in cyclopia or ethmocephaly, represents the nose" [J:92058, MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL/J

 MP:0006291 aprosencephaly "the most severe form of holoprosencephaly where the entire prosencephalon (both telencephalon and diencephalon) fails to develop while the hindbrain is largely preserved" [J:60303, MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL/J

 MP:0006293 absent olfactory placodes "absence of the paired ectodermal placodes that come to lie in the bottom of the olfactory pits as the pits are deepened by the growth of the surrounding medial and lateral nasal processes " [J:71787, MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL/J

 MP:0006295 absent sclerotome "absence of the group of mesenchymal cells that emerge from the ventromedial part of a somite and migrate toward the notochord to give rise to the ribs and vertebrae" [J:60303, MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL/J

Allelic Composition: Grem1tm1Ecan/Grem1tm1Ecan,Nogtm1.1Rmh/Nogtm1.1Rmh,Tmem163Tg(ACTB-cre)2Mrt/0
Genetic Background: involves: 129P2/OlaHsd * 129X1/SvJ * C57BL/6 * FVB/N * SJL

 MP:0006325 impaired hearing "reduced ability to percieve auditory stimuli" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

 MP:0008023 abnormal styloid process morphology "any structural abnormality in the slender needle-like pointed projection that runs downward and slightly forward from the base of the inferior surface of the petrous portion of the temporal bone where it joins the tympanic portion; it gives attachment to the styloglossus, stylohyoid, and stylopharyngeus muscles and the stylohyoid and stylomandibular ligaments" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

 MP:0008320 absent adenohypophysis "absence of the anterior part of the pituitary that secretes a variety of hormones" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * CD-1) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)

 MP:0008530 abnormal rostral-caudal patterning of the somites "anomaly in the developmental pattern of the somites along the axis that runs from the head to the caudal region of the body" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0008817 hematoma "an abnormal localized accumulation of clotted or partially clotted blood in an organ or a soft tissue space as a result of localized hemorrhage" [MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * CD-1

 MP:0008926 abnormal anterior definitive endoderm morphology "any structural anomaly of the mesendoderm which first migrates from the node and which gives rise to the gut" [PMID:12464432]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc,Smad3tm1Xfw/Smad3+
Genetic Background: involves: 129/Sv * 129S1/Sv

 MP:0009266 abnormal mesendoderm development "failure or abnormality in the formation of the embryonic cell layer that gives rise to both the endoderm and mesoderm" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL/J

Allelic Composition: Nogtm1Amc/Nogtm1Amc,Smad3tm1Xfw/Smad3+
Genetic Background: involves: 129/Sv * 129S1/Sv

 MP:0009570 abnormal right lung morphology "any structural anomaly of the organ of respiration located on the right side of the body" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0009735 abnormal prostate gland development "anomaly in the formation or pattering of the of the prostate gland" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * C57BL/6J * ICR

 MP:0010029 abnormal basicranium morphology "any structural anomaly of the sloping floor of the cranial cavity that is comprised of parts of the ethmoidal, occipital and sphenoid bones" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Cer1tm1Belo/Cer1tm1Belo,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

 MP:0010103 small thoracic cage "reduced size of the bony and cartilaginous structure enclosing the thoracic cavity, consisting of the thoracic vertebrae, ribs, costal cartilages, and sternum" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

Allelic Composition: Nogtm1Amc/Nog+
Genetic Background: B6.129S1-Nogtm1Amc

Allelic Composition: Nogtm1Amc/Nog+
Genetic Background: involves: 129S1/Sv * CD-1

 MP:0010116 abnormal primitive urogenital sinus morphology "any structural anomaly of the ventral part of the cloaca remaining after septation of the rectum, which further develops into part of the bladder, part of the prostatic part of the male urethra and the urethra and vestibule in females" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * C57BL/6J * ICR

 MP:0010884 esophagus stenosis "abnormal narrowing or constriction of the esophagus" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * C57BL/6) or (involves: 129S1/Sv * CD-1 * ICR)

 MP:0011089 complete perinatal lethality "death of all organisms of a given genotype in a population within the perinatal period (Mus: E18.5 through postnatal day 1)" [MGI:csmith]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: C57BL/6

 MP:0011091 complete prenatal lethality "death of all organisms of a given genotype in a population between fertilization and birth (Mus: approximately E18.5)" [MGI:csmith]
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Allelic Composition: Dstdt-32J/Dstdt-32J
Genetic Background: involves: 129S/Sv * 129S2/SvPas

 MP:0011099 complete lethality throughout fetal growth and development "death of all organisms of a given genotype in a population between the completion of organogenesis and birth (Mus: E14 to approximately E18.5)" [MGI:csmith]
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Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL/J

Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: B6.129S1-Nogtm1Amc

 MP:0011107 partial embryonic lethality before turning of embryo "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between somite formation and the initiation of embryo turning (Mus: E8 to less than E9)" [MGI:csmith]
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Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL/J

 MP:0011108 partial embryonic lethality during organogenesis "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between embryo turning and the completion of organogenesis (Mus: E9 to less than E14)" [MGI:csmith]
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Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL/J

 MP:0011259 abnormal cephalic neural fold morphology "any structural anomaly of the elevated margins of the neural groove that are located in the future cephalic region of the embryo" [ISBN:0-683-40008-8, MGI:csmith]
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Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL/J

 MP:0011361 pelvic kidney "an ectopic kidney located outside the renal fossa and within the pelvic cavity; pelvic kidneys may also, on occasion, occur as fused midline horseshoe kidneys" [MGI:anna]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * C57BL/6J * ICR

 MP:0011732 decreased somite size "reduced size of any of the segmental masses along the notochord of the developing embryo" [MGI:smb]
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Allelic Composition: Disp1tm1Pab/Disp1tm1Pab
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: Grem1tm1Ecan/Grem1tm1Ecan,Nogtm1.1Rmh/Nogtm1.1Rmh,Tmem163Tg(ACTB-cre)2Mrt/0
Genetic Background: involves: 129P2/OlaHsd * 129X1/SvJ * C57BL/6 * FVB/N * SJL

Allelic Composition: Grem1tm1Ecan/Grem1+,Nogtm1.1Rmh/Nogtm1.1Rmh,Tmem163Tg(ACTB-cre)2Mrt/0
Genetic Background: involves: 129P2/OlaHsd * 129X1/SvJ * C57BL/6 * FVB/N * SJL

 MP:0011759 absent Rathke s pouch "absence of the diverticulum arsing from the embryonic buccal cavity from which the anterior lobe of the pituitary gland is developed" [MGI:anna]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * CD-1) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)

 MP:0011967 increased or absent threshold for auditory brainstem response "increase in the value at which one or more sound frequencies or broadband clicks first elicits a recordable response generated by electrical activity of neurons in the ascending auditory system, or complete lack of a recordable response at any frequency or broadband click" [MGI:csmith]
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Allelic Composition: L1camtm1Mtei/Y
Genetic Background: either: (involves: 129/Sv * C57BL/6J) or (involves: 129/Sv * 129S/SvEv)

 MP:0012138 decreased forebrain size "size reduction or truncation of the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions)" [GO:0048853]
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Allelic Composition: Chrdtm1Emdr/Chrdtm1Emdr,Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL/J

 MP:0012176 abnormal head development "anomaly in the process in which the anatomical structures of the head are generated and organized" [GO:0060323]
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Allelic Composition: Grem1tm1Ecan/Grem1tm1Ecan,Nogtm1.1Rmh/Nogtm1.1Rmh,Tmem163Tg(ACTB-cre)2Mrt/0
Genetic Background: involves: 129P2/OlaHsd * 129X1/SvJ * C57BL/6 * FVB/N * SJL

 MP:0013351 abnormal Rathke s pouch development "any anomaly in the formation of the pouch of ectoderm which grows out from the upper surface of the embryonic stomodeum and gives rise to the anterior and intermediate lobes of the pituitary gland" [MGI:Anna]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * CD-1) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)

 MP:0013352 abnormal Rathke s pouch apoptosis "any change in the timing or number of Rathke s pouch cells undergoing programmed cell death" [MGI:Anna]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * CD-1) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)

 MP:0014198 absent pituitary infundibular stalk "absence of the apical portion of the tubular structure extending from the hypothalamus to the posterior lobe of the pituitary gland" [MGI:Anna]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: either: (involves: 129S1/Sv * CD-1) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)

 MP:0030066 short face "an abnormally decreased height (length) of the face" [MGI:anna]
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Allelic Composition: Nogtm1Amc/Nogtm1Amc
Genetic Background: involves: C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
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