ENSMUSG00000050229


Mus musculus

Features
Gene ID: ENSMUSG00000050229
  
Biological name :Pigm
  
Synonyms : GPI mannosyltransferase 1 / Pigm / Q8C2R7
  
Possible biological names infered from orthology : phosphatidylinositol glycan anchor biosynthesis class M / Q9H3S5
  
Species: Mus musculus
  
Chr. number: 1
Strand: 1
Band: H3
Gene start: 172376546
Gene end: 172384099
  
Corresponding Affymetrix probe sets: 10351788 (MoGene1.0st)   1418964_at (Mouse Genome 430 2.0 Array)   1440978_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000052838
NCBI entrez gene - 67556     See in Manteia.
MGI - MGI:1914806
RefSeq - NM_026234
RefSeq Peptide - NP_080510
swissprot - Q8C2R7
Ensembl - ENSMUSG00000050229
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pigmENSDARG00000024277Danio rerio
 PIGMENSGALG00000010768Gallus gallus
 PIGMENSG00000143315Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007704  Mannosyltransferase, DXD


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006506 GPI anchor biosynthetic process IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0016758 transferase activity, transferring hexosyl groups IEA


Pathways (from Reactome)
Pathway description
Synthesis of glycosylphosphatidylinositol (GPI)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Nphp1tm1.1(KOMP)Vlcg/Nphp1tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Nphp1tm1.1(KOMP)Vlcg/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000023791 Pigx / Q99LV7 / Phosphatidylinositol-glycan biosynthesis class X protein / Q8TBF5* / phosphatidylinositol glycan anchor biosynthesis class X*  / complex






 

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contact: otassy@igbmc.fr