ENSMUSG00000050796


Mus musculus

Features
Gene ID: ENSMUSG00000050796
  
Biological name :B3galt6
  
Synonyms : B3galt6 / Beta-1,3-galactosyltransferase 6 / Q91Z92
  
Possible biological names infered from orthology : Q96L58
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: E2
Gene start: 155989466
Gene end: 155992649
  
Corresponding Affymetrix probe sets: 10519234 (MoGene1.0st)   1421155_at (Mouse Genome 430 2.0 Array)   1435252_at (Mouse Genome 430 2.0 Array)   1440340_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000057521
NCBI entrez gene - 117592     See in Manteia.
MGI - MGI:2152819
RefSeq - NM_080445
RefSeq Peptide - NP_536693
swissprot - Q91Z92
Ensembl - ENSMUSG00000050796
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 b3galt6ENSDARG00000038414Danio rerio
 ENSGALG00000001859Gallus gallus
 Q96L58ENSG00000176022Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BG28 / B3galnt2 / UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 / Q8NCR0* / beta-1,3-N-acetylgalactosaminyltransferase 2*ENSMUSG0000003924223


Protein motifs (from Interpro)
Interpro ID Name
 IPR002659  Glycosyl transferase, family 31


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006024 glycosaminoglycan biosynthetic process IEA
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0015012 heparan sulfate proteoglycan biosynthetic process IEA
 biological_processGO:0030206 chondroitin sulfate biosynthetic process IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005797 Golgi medial cisterna IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008378 galactosyltransferase activity IEA
 molecular_functionGO:0008499 UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IDA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0035250 UDP-galactosyltransferase activity IEA
 molecular_functionGO:0047220 galactosylxylosylprotein 3-beta-galactosyltransferase activity IEA


Pathways (from Reactome)
Pathway description
A tetrasaccharide linker sequence is required for GAG synthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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