ENSMUSG00000051851


Mus musculus

Features
Gene ID: ENSMUSG00000051851
  
Biological name :Rtl8c
  
Synonyms : retrotransposon Gag like 8C / Rtl8c
  
Possible biological names infered from orthology : A6ZKI3
  
Species: Mus musculus
  
Chr. number: X
Strand: 1
Band: A5
Gene start: 53608032
Gene end: 53608432
  
Corresponding Affymetrix probe sets: 10599654 (MoGene1.0st)   1450080_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000069901
NCBI entrez gene - 72865     See in Manteia.
MGI - MGI:1920115
RefSeq - NM_028375
RefSeq Peptide - NP_082651
swissprot - Q9D6I0
Ensembl - ENSMUSG00000051851
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RTL8CENSG00000134590Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rtl8b / retrotransposon Gag like 8B / RTL8C* / A6ZKI3* / retrotransposon Gag like 8C*ENSMUSG0000006792465
Rtl8a / retrotransposon Gag like 8A / RTL8C* / A6ZKI3* / retrotransposon Gag like 8C*ENSMUSG0000006792565
Ldoc1 / Q7TPY9 / Protein LDOC1 / O95751* / LDOC1, regulator of NFKB signaling*ENSMUSG0000005761540
Rtl6 / Q505G4 / Retrotransposon Gag-like protein 6 / Q6ICC9* / retrotransposon Gag like 6*ENSMUSG0000005574529
Rtl5 / Q5DTT4 / retrotransposon Gag like 5 / Q5HYW3*ENSMUSG0000004919128


Protein motifs (from Interpro)
Interpro ID Name
 IPR032549  Domain of unknown function DUF4939
 IPR032567  LDOC1-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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