ENSMUSG00000055745


Mus musculus

Features
Gene ID: ENSMUSG00000055745
  
Biological name :Rtl6
  
Synonyms : Q505G4 / Retrotransposon Gag-like protein 6 / Rtl6
  
Possible biological names infered from orthology : Q6ICC9 / retrotransposon Gag like 6
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: E2
Gene start: 84553398
Gene end: 84557823
  
Corresponding Affymetrix probe sets: 10431147 (MoGene1.0st)   1423673_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000069947
NCBI entrez gene - 223732     See in Manteia.
MGI - MGI:2675858
RefSeq - NM_177630
RefSeq Peptide - NP_808298
swissprot - Q505G4
Ensembl - ENSMUSG00000055745
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RTL6ENSG00000188636Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rtl5 / Q5DTT4 / retrotransposon Gag like 5 / Q5HYW3*ENSMUSG0000004919130
Ldoc1 / Q7TPY9 / Protein LDOC1 / O95751* / LDOC1, regulator of NFKB signaling*ENSMUSG0000005761516
Rtl8b / retrotransposon Gag like 8B / RTL8C* / A6ZKI3* / retrotransposon Gag like 8C*ENSMUSG0000006792414
Rtl8a / retrotransposon Gag like 8A / RTL8C* / A6ZKI3* / retrotransposon Gag like 8C*ENSMUSG0000006792514
Rtl8c / retrotransposon Gag like 8C / A6ZKI3*ENSMUSG0000005185113


Protein motifs (from Interpro)
Interpro ID Name
 IPR032549  Domain of unknown function DUF4939
 IPR032567  LDOC1-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr