ENSMUSG00000052544


Mus musculus

Features
Gene ID: ENSMUSG00000052544
  
Biological name :St6galnac3
  
Synonyms : Q9WUV2 / ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 / St6galnac3
  
Possible biological names infered from orthology : Q8NDV1 / ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: H3
Gene start: 153198266
Gene end: 153725174
  
Corresponding Affymetrix probe sets: 10502890 (MoGene1.0st)   1420902_at (Mouse Genome 430 2.0 Array)   1420903_at (Mouse Genome 430 2.0 Array)   1457125_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000143030
Ensembl peptide - ENSMUSP00000143747
Ensembl peptide - ENSMUSP00000068598
NCBI entrez gene - 20447     See in Manteia.
MGI - MGI:1341828
RefSeq - NM_011372
RefSeq - XM_006501219
RefSeq - XM_006501220
RefSeq Peptide - NP_035502
swissprot - Q544M3
swissprot - A0A0G2JF56
swissprot - A0A0H2UKC4
swissprot - Q9WUV2
Ensembl - ENSMUSG00000052544
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 st6galnac3ENSDARG00000058473Danio rerio
 ST6GALNAC3ENSGALG00000009027Gallus gallus
 Q8NDV1ENSG00000184005Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
St6galnac4 / ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 / Q9H4F1*ENSMUSG0000007944246
Q9JM95 / St6galnac6 / Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 / AL157935.2*ENSMUSG0000002681137
St6galnac5 / ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 / Q9BVH7* / ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5*ENSMUSG0000003903736
Q76K27 / St6gal2 / Mus musculus beta galactoside alpha 2,6 sialyltransferase 2 (St6gal2), transcript variant 1, mRNA. / Q96JF0* / ST6 beta-galactoside alpha-2,6-sialyltransferase 2*ENSMUSG0000002417221
Q64685 / St6gal1 / Beta-galactoside alpha-2,6-sialyltransferase 1 / P15907* / ST6 beta-galactoside alpha-2,6-sialyltransferase 1*ENSMUSG0000002288517


Protein motifs (from Interpro)
Interpro ID Name
 IPR001675  Glycosyl transferase family 29
 IPR012163  Sialyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006677 glycosylceramide metabolic process ISO
 biological_processGO:0006687 glycosphingolipid metabolic process IEA
 biological_processGO:0009100 glycoprotein metabolic process IEA
 biological_processGO:0009311 oligosaccharide metabolic process IBA
 biological_processGO:0018279 protein N-linked glycosylation via asparagine IBA
 biological_processGO:0097503 sialylation IEA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0001665 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IBA
 molecular_functionGO:0008373 sialyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
Sialic acid metabolism
Termination of O-glycan biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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