ENSMUSG00000053768


Mus musculus

Features
Gene ID: ENSMUSG00000053768
  
Biological name :Chchd3
  
Synonyms : Chchd3 / Mus musculus coiled-coil-helix-coiled-coil-helix domain containing 3 (Chchd3), transcript variant 2, mRNA. / Q9CRB9
  
Possible biological names infered from orthology : coiled-coil-helix-coiled-coil-helix domain containing 3 / Q9NX63
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: A3.3
Gene start: 32790976
Gene end: 33060260
  
Corresponding Affymetrix probe sets: 10543835 (MoGene1.0st)   1431241_at (Mouse Genome 430 2.0 Array)   1451504_at (Mouse Genome 430 2.0 Array)   1459143_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000110743
Ensembl peptide - ENSMUSP00000123220
Ensembl peptide - ENSMUSP00000138484
Ensembl peptide - ENSMUSP00000070149
Ensembl peptide - ENSMUSP00000121589
NCBI entrez gene - 66075     See in Manteia.
MGI - MGI:1913325
RefSeq - XM_006506468
RefSeq - NM_001355667
RefSeq - NM_025336
RefSeq - XM_006506467
RefSeq Peptide - NP_001342596
RefSeq Peptide - NP_079612
swissprot - Q9CRB9
swissprot - Q9D9P1
swissprot - F6QFL0
swissprot - S4R238
swissprot - D3Z0L4
Ensembl - ENSMUSG00000053768
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chchd3aENSDARG00000032919Danio rerio
 chchd3bENSDARG00000034933Danio rerio
 CHCHD3ENSGALG00000006489Gallus gallus
 CHCHD3ENSG00000106554Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Chchd6 / Q91VN4 / MICOS complex subunit Mic25 / Q9BRQ6* / coiled-coil-helix-coiled-coil-helix domain containing 6*ENSMUSG0000003008633


Protein motifs (from Interpro)
Interpro ID Name
 IPR007964  MICOS complex subunit MIC19/MIC25


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007007 inner mitochondrial membrane organization IEA
 biological_processGO:0008053 mitochondrial fusion IEA
 biological_processGO:0042407 cristae formation IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0061617 MICOS complex IEA
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019902 phosphatase binding IEA
 molecular_functionGO:0032947 protein-containing complex scaffold activity IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011094 complete embryonic lethality before implantation "death of all organisms of a given genotype in a population between fertilization and implantation (Mus: E0 to less than E4.5)" [MGI:csmith]
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Allelic Composition: CbfbTgTn(sb-cHS4,Tyr)2512E-2Ove/CbfbTgTn(sb-cHS4,Tyr)2512E-2Ove
Genetic Background: FVB/N-CbfbTgTn(sb-cHS4,Tyr)2512E-2Ove

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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