ENSMUSG00000053930


Mus musculus

Features
Gene ID: ENSMUSG00000053930
  
Biological name :Shisa6
  
Synonyms : Q3UH99 / Shisa6 / shisa family member 6
  
Possible biological names infered from orthology : Q6ZSJ9
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: B3
Gene start: 66211725
Gene end: 66525964
  
Corresponding Affymetrix probe sets: 10387100 (MoGene1.0st)   1441785_at (Mouse Genome 430 2.0 Array)   1455512_at (Mouse Genome 430 2.0 Array)   1455919_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000071025
Ensembl peptide - ENSMUSP00000120862
NCBI entrez gene - 380702     See in Manteia.
MGI - MGI:2685725
RefSeq - NM_001034874
RefSeq - XM_006533619
RefSeq Peptide - NP_001030046
swissprot - F6VQZ6
swissprot - Q3UH99
Ensembl - ENSMUSG00000053930
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 shisa6ENSDARG00000115501Danio rerio
 Q6ZSJ9ENSG00000188803Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8C3Q5 / Shisa7 / Protein shisa-7 / A6NL88* / shisa family member 7*ENSMUSG0000005355031
Q9CZN4 / Shisa9 / Protein shisa-9 / B4DS77* / shisa family member 9*ENSMUSG0000002249425
Shisa8 / shisa family member 8 / B8ZZ34*ENSMUSG0000009688318


Protein motifs (from Interpro)
Interpro ID Name
 IPR026910  Shisa family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007283 spermatogenesis IMP
 biological_processGO:0048172 regulation of short-term neuronal synaptic plasticity IBA
 biological_processGO:0090090 negative regulation of canonical Wnt signaling pathway IMP
 biological_processGO:0098976 excitatory chemical synaptic transmission IMP
 biological_processGO:1904717 regulation of AMPA glutamate receptor clustering IMP
 cellular_componentGO:0014069 postsynaptic density IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032281 AMPA glutamate receptor complex IDA
 cellular_componentGO:0045202 synapse IBA
 cellular_componentGO:0098985 asymmetric, glutamatergic, excitatory synapse IDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0030165 PDZ domain binding IPI
 molecular_functionGO:0035255 ionotropic glutamate receptor binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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