ENSMUSG00000054894


Mus musculus

Features
Gene ID: ENSMUSG00000054894
  
Biological name :Atp5s
  
Synonyms : Atp5s / ATP synthase subunit s, mitochondrial / Q9CRA7
  
Possible biological names infered from orthology : ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) / Q99766
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: C2
Gene start: 69724950
Gene end: 69744660
  
Corresponding Affymetrix probe sets: 10396112 (MoGene1.0st)   1417970_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000152430
Ensembl peptide - ENSMUSP00000152757
Ensembl peptide - ENSMUSP00000152704
Ensembl peptide - ENSMUSP00000021372
Ensembl peptide - ENSMUSP00000152071
NCBI entrez gene - 68055     See in Manteia.
MGI - MGI:1915305
RefSeq - XM_011244165
RefSeq - XM_006516180
RefSeq - XM_006516181
RefSeq - XM_011244162
RefSeq - XM_011244163
RefSeq - XM_011244164
RefSeq - NM_026536
RefSeq Peptide - NP_080812
swissprot - A0A1Y7VK84
swissprot - A0A1Y7VIP0
swissprot - A0A1Y7VMG2
swissprot - Q9CRA7
Ensembl - ENSMUSG00000054894
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atp5sENSDARG00000012072Danio rerio
 ATP5SENSGALG00000012287Gallus gallus
 ATP5SENSG00000125375Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Dmac2 / Q9D7K5 / Distal membrane-arm assembly complex protein 2 / Q9NW81* / distal membrane arm assembly complex 2*ENSMUSG0000005722923


Protein motifs (from Interpro)
Interpro ID Name
 IPR026063  ATP synthase subunit s, mitochondrial
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006754 ATP biosynthetic process IEA
 biological_processGO:0006811 ion transport IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Formation of ATP by chemiosmotic coupling
Cristae formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005287 narrow eye opening "less than the normal distance from one eyelid to the other " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, J:71350]
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Allelic Composition: Aspatm1b(EUCOMM)Wtsi/Aspatm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Aspatm1b(EUCOMM)Wtsi/Ieg

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000022956 Atp5o / Q9DB20 / ATP synthase subunit O, mitochondrial / P48047* / ATP5PO* / AP000311.1* / ATP synthase peripheral stalk subunit OSCP*  / reaction / complex
 ENSMUSG00000054894 Atp5s / Q9CRA7 / ATP synthase subunit s, mitochondrial / Q99766* / ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B)*  / complex / reaction






 

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