ENSMUSG00000056536


Mus musculus

Features
Gene ID: ENSMUSG00000056536
  
Biological name :Pign
  
Synonyms : phosphatidylinositol glycan anchor biosynthesis class N / Pign
  
Possible biological names infered from orthology : O95427
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: E2.1
Gene start: 105518422
Gene end: 105663677
  
Corresponding Affymetrix probe sets: 10357008 (MoGene1.0st)   1421284_at (Mouse Genome 430 2.0 Array)   1425813_at (Mouse Genome 430 2.0 Array)   1425997_a_at (Mouse Genome 430 2.0 Array)   1432115_a_at (Mouse Genome 430 2.0 Array)   1435262_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000139490
Ensembl peptide - ENSMUSP00000140844
Ensembl peptide - ENSMUSP00000140020
Ensembl peptide - ENSMUSP00000139638
Ensembl peptide - ENSMUSP00000069969
NCBI entrez gene - 27392     See in Manteia.
MGI - MGI:1351629
RefSeq - XM_017321076
RefSeq - NM_013784
RefSeq - XM_006529676
RefSeq - XM_006529677
RefSeq - XM_006529678
RefSeq Peptide - NP_038812
swissprot - A0A087WNT9
swissprot - G3X9F1
swissprot - A0A087WQ32
swissprot - A0A087WS03
Ensembl - ENSMUSG00000056536
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pignENSDARG00000077532Danio rerio
 PIGNENSGALG00000012903Gallus gallus
 PIGNENSG00000197563Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002591  Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
 IPR007070  GPI ethanolamine phosphate transferase 1
 IPR017849  Alkaline phosphatase-like, alpha/beta/alpha
 IPR017850  Alkaline-phosphatase-like, core domain superfamily
 IPR017852  GPI ethanolamine phosphate transferase 1, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006506 GPI anchor biosynthetic process IEA
 biological_processGO:0008152 metabolic process IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0051377 mannose-ethanolamine phosphotransferase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of glycosylphosphatidylinositol (GPI)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000784 forebrain hypoplasia "reduced cell number in the anterior primitive cerebral vesicle; most rostral of three primary vesicles of the embryonic neural tube" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Chd7Ome/Chd7+
Genetic Background: involves: BALB/cByJ * C57BL/6J

 MP:0001297 microphthalmia "reduced average size of the eyes" [J:18048]
Show

Allelic Composition: Chd7Ome/Chd7+
Genetic Background: involves: BALB/cByJ * C57BL/6J

 MP:0001695 abnormal gastrulation "anomalous development and invagination of the embryonic germ layers" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Chd7Ome/Chd7+
Genetic Background: involves: BALB/cByJ * C57BL/6J

 MP:0005262 coloboma "anomaly in which some of the structures of the eye are absent due to incomplete fusion of the fetal intraocular fissure during gestation" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Chd7Ome/Chd7+
Genetic Background: involves: BALB/cByJ * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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