ENSMUSG00000058392


Mus musculus

Features
Gene ID: ENSMUSG00000058392
  
Biological name :Rrp1b
  
Synonyms : Q91YK2 / Ribosomal RNA processing B / Rrp1b
  
Possible biological names infered from orthology : Q14684 / ribosomal RNA processing 1B
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: B1
Gene start: 32036100
Gene end: 32062865
  
Corresponding Affymetrix probe sets: 10443836 (MoGene1.0st)   1452118_at (Mouse Genome 430 2.0 Array)   1452119_at (Mouse Genome 430 2.0 Array)   1456117_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000080085
Ensembl peptide - ENSMUSP00000123044
NCBI entrez gene - 72462     See in Manteia.
MGI - MGI:1919712
RefSeq - XM_006524973
RefSeq - NM_001163734
RefSeq - NM_028244
RefSeq - XM_006524971
RefSeq - XM_006524972
RefSeq Peptide - NP_001157206
RefSeq Peptide - NP_082520
swissprot - Q91YK2
swissprot - D6RDD0
Ensembl - ENSMUSG00000058392
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rrp1ENSDARG00000103337Danio rerio
 RRP1BENSGALG00000035696Gallus gallus
 RRP1BENSG00000160208Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rrp1 / P56183 / Ribosomal RNA processing A / P56182* / ribosomal RNA processing 1*ENSMUSG0000006103223


Protein motifs (from Interpro)
Interpro ID Name
 IPR010301  Nucleolar, Nop52


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0010923 negative regulation of phosphatase activity IEA
 biological_processGO:0034260 negative regulation of GTPase activity IMP
 biological_processGO:0043065 positive regulation of apoptotic process IEA
 biological_processGO:0043484 regulation of RNA splicing IMP
 biological_processGO:0043923 positive regulation by host of viral transcription IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0098586 cellular response to virus IEA
 cellular_componentGO:0000791 euchromatin IDA
 cellular_componentGO:0000792 heterochromatin IDA
 cellular_componentGO:0001652 granular component IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005730 nucleolus ISS
 cellular_componentGO:0030687 preribosome, large subunit precursor IBA
 cellular_componentGO:0030688 preribosome, small subunit precursor IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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