ENSMUSG00000060227


Mus musculus

Features
Gene ID: ENSMUSG00000060227
  
Biological name :Casc4
  
Synonyms : Casc4 / Protein CASC4 / Q6P2L7
  
Possible biological names infered from orthology : cancer susceptibility 4 / Q6P4E1
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: E5
Gene start: 121866970
Gene end: 121936220
  
Corresponding Affymetrix probe sets: 10475378 (MoGene1.0st)   1433779_at (Mouse Genome 430 2.0 Array)   1440248_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000077811
Ensembl peptide - ENSMUSP00000087360
Ensembl peptide - ENSMUSP00000106216
Ensembl peptide - ENSMUSP00000117883
Ensembl peptide - ENSMUSP00000087357
NCBI entrez gene - 319996     See in Manteia.
MGI - MGI:2443129
RefSeq - NM_001205370
RefSeq - NM_001205369
RefSeq - NM_001205371
RefSeq - NM_177054
RefSeq - NM_199038
RefSeq Peptide - NP_950239
RefSeq Peptide - NP_001192299
RefSeq Peptide - NP_001192300
RefSeq Peptide - NP_796028
RefSeq Peptide - NP_001192298
swissprot - Q6P2L7
swissprot - E9PZJ6
swissprot - A2AR60
Ensembl - ENSMUSG00000060227
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 casc4ENSDARG00000074490Danio rerio
 CASC4ENSGALG00000008208Gallus gallus
 CASC4ENSG00000166734Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Golm1 / Q91XA2 / golgi membrane protein 1 / Q8NBJ4*ENSMUSG0000002155620


Protein motifs (from Interpro)
Interpro ID Name
 IPR026139  GOLM1/CASC4 family
 IPR026141  Cancer susceptibility candidate 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0013155 decreased KLRG1+ CD8 alpha beta T cell number "decrease in the number of CD8+ alpha beta T cells that express KLRG1, a marker of effector and memory T cells" [MGI:csmith]
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Allelic Composition: Xbp1tm1a(EUCOMM)Wtsi/Xbp1+
Genetic Background: C57BL/6N-Xbp1tm1a(EUCOMM)Wtsi/Ics

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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