ENSMUSG00000060636


Mus musculus

Features
Gene ID: ENSMUSG00000060636
  
Biological name :Rpl35a
  
Synonyms : O55142 / ribosomal protein L35A / Rpl35a
  
Possible biological names infered from orthology : P18077
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: B3
Gene start: 33056453
Gene end: 33060189
  
Corresponding Affymetrix probe sets: 10360737 (MoGene1.0st)   10407507 (MoGene1.0st)   10435187 (MoGene1.0st)   10435455 (MoGene1.0st)   10437627 (MoGene1.0st)   10449549 (MoGene1.0st)   10485685 (MoGene1.0st)   10489186 (MoGene1.0st)   10521036 (MoGene1.0st)   10533626 (MoGene1.0st)   10538080 (MoGene1.0st)   10544540 (MoGene1.0st)   1417317_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000110728
Ensembl peptide - ENSMUSP00000077857
Ensembl peptide - ENSMUSP00000110727
Ensembl peptide - ENSMUSP00000110730
Ensembl peptide - ENSMUSP00000110731
NCBI entrez gene - 57808     See in Manteia.
MGI - MGI:1928894
RefSeq - NM_001130484
RefSeq - NM_001130485
RefSeq - NM_021338
RefSeq Peptide - NP_001123956
RefSeq Peptide - NP_001123957
RefSeq Peptide - NP_067313
swissprot - O55142
swissprot - Q6ZWX1
Ensembl - ENSMUSG00000060636
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl35aENSDARG00000088030Danio rerio
 RPL35AENSGALG00000007611Gallus gallus
 P18077ENSG00000182899Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001780  Ribosomal protein L35A
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR018266  Ribosomal protein L35Ae, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006364 rRNA processing ISO
 biological_processGO:0006412 translation IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis ISO
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0031012 extracellular matrix ISO
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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