ENSMUSG00000063888


Mus musculus

Features
Gene ID: ENSMUSG00000063888
  
Biological name :Rpl7l1
  
Synonyms : 60S ribosomal protein L7-like 1 / Q9D8M4 / Rpl7l1
  
Possible biological names infered from orthology : Q6DKI1 / ribosomal protein L7 like 1
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: C
Gene start: 46773907
Gene end: 46782656
  
Corresponding Affymetrix probe sets: 10451472 (MoGene1.0st)   1426386_at (Mouse Genome 430 2.0 Array)   1439780_at (Mouse Genome 430 2.0 Array)   1452049_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000092888
NCBI entrez gene - 66229     See in Manteia.
MGI - MGI:1913479
RefSeq - NM_025433
RefSeq Peptide - NP_079709
swissprot - Q9D8M4
Ensembl - ENSMUSG00000063888
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl7l1ENSDARG00000042864Danio rerio
 RPL7L1ENSGALG00000011974Gallus gallus
 Q6DKI1ENSG00000146223Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rpl7 / P14148 / ribosomal protein L7ENSMUSG0000004371643


Protein motifs (from Interpro)
Interpro ID Name
 IPR005998  Ribosomal protein L7, eukaryotic
 IPR012988  Ribosomal protein L30, N-terminal
 IPR016082  Ribosomal protein L30, ferredoxin-like fold domain
 IPR018038  Ribosomal protein L30, conserved site
 IPR035808  Ribosomal protein L7, eukaryotic/archaeal
 IPR036919  Ribosomal protein L30, ferredoxin-like fold domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0001825 blastocyst formation IMP
 biological_processGO:0002181 cytoplasmic translation IBA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Mthfd1tm2b(KOMP)Wtsi/Mthfd1tm2b(KOMP)Wtsi
Genetic Background: C57BL/6N-Mthfd1tm2b(KOMP)Wtsi/Bay

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr