ENSMUSG00000064181


Mus musculus

Features
Gene ID: ENSMUSG00000064181
  
Biological name :Rab3ip
  
Synonyms : Q68EF0 / RAB3A interacting protein / Rab3ip
  
Possible biological names infered from orthology : AC025263.2
  
Species: Mus musculus
  
Chr. number: 10
Strand: -1
Band: D2
Gene start: 116905784
Gene end: 116950769
  
Corresponding Affymetrix probe sets: 10372583 (MoGene1.0st)   1434306_at (Mouse Genome 430 2.0 Array)   1436103_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000151708
Ensembl peptide - ENSMUSP00000151778
Ensembl peptide - ENSMUSP00000020375
Ensembl peptide - ENSMUSP00000151326
NCBI entrez gene - 216363     See in Manteia.
MGI - MGI:105933
RefSeq - XM_017313908
RefSeq - XM_006513544
RefSeq - XM_006513545
RefSeq - XM_006513546
RefSeq - XM_006513547
RefSeq - XM_006513548
RefSeq - NM_001003950
RefSeq Peptide - NP_001003950
swissprot - A0A1W2P7S9
swissprot - A0A1W2P7K6
swissprot - A0A1W2P6M4
swissprot - Q68EF0
Ensembl - ENSMUSG00000064181
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab3ipENSDARG00000101908Danio rerio
 ENSGALG00000009959Gallus gallus
 AC025263.2ENSG00000258052Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8VDV3 / Rab3il1 / Mus musculus RAB3A interacting protein (rabin3)-like 1 (Rab3il1), transcript variant 2, mRNA. / Q8TBN0* / RAB3A interacting protein like 1*ENSMUSG0000002466341


Protein motifs (from Interpro)
Interpro ID Name
 IPR009449  GDP/GTP exchange factor Sec2, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006612 protein targeting to membrane ISO
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0033365 protein localization to organelle ISO
 biological_processGO:0060271 cilium assembly ISO
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome ISO
 cellular_componentGO:0005829 cytosol ISS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0030027 lamellipodium IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0005085 guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity ISS
 molecular_functionGO:0042802 identical protein binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000063 reduced bone density "decreased mineral content of bone; indicator of bone strength" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CLS, J:57315]
Show

Allelic Composition: Psphtm1.1(KOMP)Vlcg/Psphtm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Psphtm1.1(KOMP)Vlcg/Ucd

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Avpr2tm1Jwe/Avpr2+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * CF-1

 MP:0002727 decreased circulating insulin level "less than normal levels of insulin in the blood" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, dlb:Donna Burkart , Mouse Genome Informatics Curator]
Show

Allelic Composition: Psphtm1.1(KOMP)Vlcg/Psphtm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Psphtm1.1(KOMP)Vlcg/Ucd

 MP:0002968 increased circulating alkaline phosphatase level "elevated activity of this enzyme, which hydrolyzes orthophosphoric monoesters, found in the blood" [RGD:Rat Genome Database submission, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Psphtm1.1(KOMP)Vlcg/Psphtm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Psphtm1.1(KOMP)Vlcg/Ucd

 MP:0009141 increased prepulse inhibition "increase in the ability of a relatively mild stimulus to suppress the response to a strong, startle-eliciting stimulus" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Psphtm1.1(KOMP)Vlcg/Psphtm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Psphtm1.1(KOMP)Vlcg/Ucd

 MP:0010124 decreased bone mineral content "reduction in the amount (usually in grams/cm) of bone mineral divided by a bone-scanned area" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Psphtm1.1(KOMP)Vlcg/Psphtm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Psphtm1.1(KOMP)Vlcg/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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