ENSDARG00000101908


Danio rerio

Features
Gene ID: ENSDARG00000101908
  
Biological name :rab3ip
  
Synonyms : RAB3A interacting protein (rabin3) / rab3ip
  
Possible biological names infered from orthology : AC025263.2 / Q68EF0 / Q96QF0 / RAB3A interacting protein
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 72723304
Gene end: 72789220
  
Corresponding Affymetrix probe sets: Dr.11691.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000138116
Ensembl peptide - ENSDARP00000136895
Ensembl peptide - ENSDARP00000145109
Ensembl peptide - ENSDARP00000149993
swissprot - A0A0R4IR55
swissprot - A0A0R4IR15
ZFIN ID - ZDB-GENE-050522-323
Ensembl - ENSDARG00000101908
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000009959Gallus gallus
 AC025263.2ENSG00000258052Homo sapiens
 Q96QF0ENSG00000127328Homo sapiens
 Q68EF0ENSMUSG00000064181Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab3il1 / RAB3A interacting protein (rabin3)-like 1ENSDARG0000000771144


Protein motifs (from Interpro)
Interpro ID Name
 IPR009449  GDP/GTP exchange factor Sec2, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032402 melanosome transport IMP
 biological_processGO:0070121 Kupffer"s vesicle development IMP
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Anchoring of the basal body to the plasma membrane
VxPx cargo-targeting to cilium
BBSome-mediated cargo-targeting to cilium
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle morphology , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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