Manteia

ENSMUSG00000071662

Mus musculus

Features

Gene ID:	ENSMUSG00000071662

Biological name :	Polr2g

Synonyms :	DNA-directed RNA polymerase II subunit RPB7 / P62488 / Polr2g

Possible biological names infered from orthology :	P62487 / RNA polymerase II subunit G

Species:	Mus musculus

Chr. number:	19
Strand:	-1
Band:	A
Gene start:	8793129
Gene end:	8798557

Corresponding Affymetrix probe sets:	10465804 (MoGene1.0st) 1416270_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000093980 NCBI entrez gene - 67710 See in Manteia. MGI - MGI:1914960 RefSeq - NM_026329 RefSeq Peptide - NP_080605 swissprot - P62488 Ensembl - ENSMUSG00000071662

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name

Similarity(%)

No match

Protein motifs (from Interpro)

Interpro ID	Name
IPR003029	S1 domain
IPR005576	RNA polymerase Rpb7, N-terminal
IPR012340	Nucleic acid-binding, OB-fold
IPR022967	RNA-binding domain, S1
IPR036898	RNA polymerase Rpb7-like, N-terminal domain superfamily

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0000291	nuclear-transcribed mRNA catabolic process, exonucleolytic	IBA
biological_process	GO:0006351	transcription, DNA-templated	IEA
biological_process	GO:0006366	transcription by RNA polymerase II	IEA
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter	IBA
biological_process	GO:0006915	apoptotic process	IEA
biological_process	GO:0045948	positive regulation of translational initiation	IBA
biological_process	GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	IBA
cellular_component	GO:0000932	P-body	IBA
cellular_component	GO:0005634	nucleus	ISO
cellular_component	GO:0005654	nucleoplasm	IEA
cellular_component	GO:0005665	DNA-directed RNA polymerase II, core complex	IEA
molecular_function	GO:0003676	nucleic acid binding	IEA
molecular_function	GO:0003697	single-stranded DNA binding	IBA
molecular_function	GO:0003723	RNA binding	IEA
molecular_function	GO:0003727	single-stranded RNA binding	IBA
molecular_function	GO:0003899	DNA-directed 5"-3" RNA polymerase activity	IBA
molecular_function	GO:0016740	transferase activity	IEA
molecular_function	GO:0016779	nucleotidyltransferase activity	IEA
molecular_function	GO:0031369	translation initiation factor binding	IBA

Pathways (from Reactome)

Pathway description

Formation of RNA Pol II elongation complex

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr