ENSMUSG00000072572


Mus musculus

Features
Gene ID: ENSMUSG00000072572
  
Biological name :Slc39a2
  
Synonyms : Slc39a2 / solute carrier family 39 member 2
  
Possible biological names infered from orthology : Q9NP94
  
Species: Mus musculus
  
Chr. number: 14
Strand: 1
Band: C1
Gene start: 51892889
Gene end: 51896745
  
Corresponding Affymetrix probe sets: 10414612 (MoGene1.0st)   1443163_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000038707
NCBI entrez gene - 214922     See in Manteia.
MGI - MGI:2684326
RefSeq - NM_001039676
RefSeq - XM_006518796
RefSeq Peptide - NP_001034765
swissprot - G3X943
Ensembl - ENSMUSG00000072572
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P59889ENSDARG00000058257Danio rerio
 Q9NP94ENSG00000165794Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9QZ03 / Slc39a1 / Zinc transporter ZIP1 / Q9NY26* / solute carrier family 39 member 1*ENSMUSG0000005231035
Q99K24 / Slc39a3 / Mus musculus solute carrier family 39 (zinc transporter), member 3 (Slc39a3), transcript variant 2, mRNA. / Q9BRY0* / solute carrier family 39 member 3*ENSMUSG0000004682229


Protein motifs (from Interpro)
Interpro ID Name
 IPR003689  Zinc/iron permease


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006829 zinc ion transport IDA
 biological_processGO:0030001 metal ion transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0071577 zinc ion transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0005385 zinc ion transmembrane transporter activity IEA
 molecular_functionGO:0046873 metal ion transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Zinc influx into cells by the SLC39 gene family


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000420 ruffled hair "fuzzy, irregular appearance of the hair" [J:50844]
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Allelic Composition: Mx1s1/Mx1s1
Genetic Background: C57BL/6

 MP:0000428 abnormal craniofacial morphology "anomalous structure or development of the face and/or cranium" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Mx1s1/Mx1s1
Genetic Background: C57BL/6

 MP:0001192 scaly skin "skin covered with shedding scales or flakes" [J:65146]
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Allelic Composition: Mx1s1/Mx1s1
Genetic Background: C57BL/6

 MP:0003984 embryonic growth retardation "slow or limited development before birth" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Mx1s1/Mx1s1
Genetic Background: C57BL/6

 MP:0004231 abnormal calcium ion homeostasis "anomaly in the processes involved in the maintenance of an internal equilibrium of calcium ions within the body or between a cell and its external environment" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Mx1s1/Mx1s1
Genetic Background: C57BL/6

 MP:0006279 abnormal limb development "anomaly in the formation of the limbs" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Mx1s1/Mx1s1
Genetic Background: C57BL/6

 MP:0008738 abnormal liver iron level "anomaly in the amount of iron present in the liver tissue" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Mx1s1/Mx1s1
Genetic Background: C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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