ENSMUSG00000073399


Mus musculus

Features
Gene ID: ENSMUSG00000073399
  
Biological name :Trim40
  
Synonyms : Q3UWA4 / Trim40 / tripartite motif-containing 40
  
Possible biological names infered from orthology : Q6P9F5
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: B1
Gene start: 36881598
Gene end: 36890123
  
Corresponding Affymetrix probe sets: 10450808 (MoGene1.0st)   1457253_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000084400
Ensembl peptide - ENSMUSP00000133581
NCBI entrez gene - 195359     See in Manteia.
MGI - MGI:2684881
RefSeq - XM_017317358
RefSeq - NM_001033235
RefSeq - NM_001172168
RefSeq - XM_006523907
RefSeq - XM_006523908
RefSeq - XM_006523909
RefSeq - XM_017317357
RefSeq - XM_006523902
RefSeq - XM_006523903
RefSeq - XM_006523904
RefSeq - XM_006523906
RefSeq Peptide - NP_001028407
RefSeq Peptide - NP_001165639
swissprot - Q3UWA4
swissprot - B7ZWG4
Ensembl - ENSMUSG00000073399
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6P9F5ENSG00000204614Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR018957  Zinc finger, C3HC4 RING-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030308 negative regulation of cell growth IEA
 biological_processGO:0032088 negative regulation of NF-kappaB transcription factor activity IEA
 biological_processGO:0042177 negative regulation of protein catabolic process IEA
 biological_processGO:0045116 protein neddylation IEA
 biological_processGO:1900181 negative regulation of protein localization to nucleus IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0008385 IkappaB kinase complex IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr