ENSMUSG00000073877


Mus musculus

Features
Gene ID: ENSMUSG00000073877
  
Biological name :Gm13306
  
Synonyms : Gm13306 / predicted gene 13306 / Q9Z1X0
  
Possible biological names infered from orthology : CCL27 / C-C motif chemokine ligand 27 / Q9Y4X3
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: A5
Gene start: 42153436
Gene end: 42158839
  
Corresponding Affymetrix probe sets: 10504164 (MoGene1.0st)   10504194 (MoGene1.0st)   10512315 (MoGene1.0st)   1419188_s_at (Mouse Genome 430 2.0 Array)   1430375_a_at (Mouse Genome 430 2.0 Array)   1434962_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000095726
Ensembl peptide - ENSMUSP00000103653
NCBI entrez gene - 100039863     See in Manteia.
MGI - MGI:3713752
RefSeq - XM_017319875
RefSeq - NM_001164046
RefSeq - NM_001199962
RefSeq - NM_001199963
RefSeq - XM_006537497
RefSeq - XM_017319874
RefSeq Peptide - NP_001157518
RefSeq Peptide - NP_001186891
RefSeq Peptide - NP_001186892
swissprot - Q9Z1X0
Ensembl - ENSMUSG00000073877
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCL27ENSG00000213927Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ccl27a / chemokine (C-C motif) ligand 27A / CCL27* / Q9Y4X3* / C-C motif chemokine ligand 27*ENSMUSG0000007388899
Ccl27b / Q9Z1X0 / chemokine (C-C motif) ligand 27b / CCL27* / Q9Y4X3* / C-C motif chemokine ligand 27*ENSMUSG0000009682677
Ccl28 / Q9JIL2 / C-C motif chemokine 28 / Q9NRJ3* / C-C motif chemokine ligand 28*ENSMUSG0000007471522


Protein motifs (from Interpro)
Interpro ID Name
 IPR001811  Chemokine interleukin-8-like domain
 IPR036048  Chemokine interleukin-8-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006955 immune response IEA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0010820 positive regulation of T cell chemotaxis IDA
 biological_processGO:0060326 cell chemotaxis IEA
 biological_processGO:0071677 positive regulation of mononuclear cell migration IDA
 biological_processGO:2000251 positive regulation of actin cytoskeleton reorganization IDA
 cellular_componentGO:0005576 extracellular region IDA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0005125 cytokine activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008009 chemokine activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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