ENSMUSG00000073888


Mus musculus

Features
Gene ID: ENSMUSG00000073888
  
Biological name :Ccl27a
  
Synonyms : Ccl27a / chemokine (C-C motif) ligand 27A
  
Possible biological names infered from orthology : CCL27 / C-C motif chemokine ligand 27 / Q9Y4X3
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: A5
Gene start: 41769467
Gene end: 41774247
  
Corresponding Affymetrix probe sets: 10504164 (MoGene1.0st)   10504194 (MoGene1.0st)   10512315 (MoGene1.0st)   1419188_s_at (Mouse Genome 430 2.0 Array)   1430375_a_at (Mouse Genome 430 2.0 Array)   1434962_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000133827
Ensembl peptide - ENSMUSP00000103671
Ensembl peptide - ENSMUSP00000103672
Ensembl peptide - ENSMUSP00000153974
Ensembl peptide - ENSMUSP00000154658
Ensembl peptide - ENSMUSP00000154160
Ensembl peptide - ENSMUSP00000154105
Ensembl peptide - ENSMUSP00000073990
Ensembl peptide - ENSMUSP00000103667
Ensembl peptide - ENSMUSP00000103668
Ensembl peptide - ENSMUSP00000103670
NCBI entrez gene - 20301     See in Manteia.
NCBI entrez gene - 100040048     See in Manteia.
MGI - MGI:1343459
RefSeq - XM_011249967
RefSeq - NM_001048179
RefSeq - NM_001164044
RefSeq - NM_001164045
RefSeq - NM_001199960
RefSeq - NM_001199961
RefSeq - NM_011336
RefSeq - XM_006537704
RefSeq - XM_006537705
RefSeq - XM_006537706
RefSeq - XM_006537708
RefSeq - XM_006537709
RefSeq Peptide - NP_001041644
RefSeq Peptide - NP_001186889
RefSeq Peptide - NP_001186890
RefSeq Peptide - NP_001333994
RefSeq Peptide - NP_035466
RefSeq Peptide - NP_001157516
RefSeq Peptide - NP_001157517
swissprot - A2AMS8
swissprot - A2AMS7
swissprot - A2AMS6
swissprot - A2AMS5
swissprot - A0A0R4J0X6
Ensembl - ENSMUSG00000073888
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCL27ENSG00000213927Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9Z1X0 / Gm13306 / predicted gene 13306 / CCL27* / Q9Y4X3* / C-C motif chemokine ligand 27*ENSMUSG0000007387782
Ccl27b / Q9Z1X0 / chemokine (C-C motif) ligand 27b / CCL27* / Q9Y4X3* / C-C motif chemokine ligand 27*ENSMUSG0000009682663
Ccl28 / Q9JIL2 / C-C motif chemokine 28 / Q9NRJ3* / C-C motif chemokine ligand 28*ENSMUSG0000007471518


Protein motifs (from Interpro)
Interpro ID Name
 IPR001811  Chemokine interleukin-8-like domain
 IPR036048  Chemokine interleukin-8-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006955 immune response IEA
 biological_processGO:0060326 cell chemotaxis IEA
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0008009 chemokine activity IEA


Pathways (from Reactome)
Pathway description
Chemokine receptors bind chemokines
G alpha (i) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005635 decreased circulating bilirubin level "less thant the normal concentration in the blood of this yellow heme breakdown product" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, RGD:Rat Genome Database submission]
Show

Allelic Composition: Casq2tm1b(KOMP)Wtsi/Casq2+
Genetic Background: C57BL/6N-Casq2tm1b(KOMP)Wtsi/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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