ENSMUSG00000075273


Mus musculus

Features
Gene ID: ENSMUSG00000075273
  
Biological name :Ttc30b
  
Synonyms : Q9CY00 / tetratricopeptide repeat domain 30B / Ttc30b
  
Possible biological names infered from orthology : Q86WT1 / Q8N4P2 / tetratricopeptide repeat domain 30A / TTC30A
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: C3
Gene start: 75935849
Gene end: 75938585
  
Corresponding Affymetrix probe sets: 10483819 (MoGene1.0st)   10483822 (MoGene1.0st)   1423672_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000097576
NCBI entrez gene - 72421     See in Manteia.
MGI - MGI:1919671
RefSeq - NM_028235
RefSeq Peptide - NP_082511
swissprot - B2RXA2
swissprot - Q9CY00
Ensembl - ENSMUSG00000075273
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 flrENSDARG00000038024Danio rerio
 TTC30BENSGALG00000009224Gallus gallus
 Q86WT1ENSG00000197557Homo sapiens
 Q8N4P2ENSG00000196659Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A2AKQ8 / Ttc30a2 / tetratricopeptide repeat domain 30A2 / Q8N4P2* / TTC30A* / Q86WT1* / TTC30B* / tetratricopeptide repeat domain 30A* / tetratricopeptide repeat domain 30B*ENSMUSG0000007527295
Q99J38 / Ttc30a1 / tetratricopeptide repeat domain 30A1 / Q8N4P2* / TTC30A* / Q86WT1* / TTC30B* / tetratricopeptide repeat domain 30A* / tetratricopeptide repeat domain 30B*ENSMUSG0000007527194


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0042073 intraciliary transport IC
 biological_processGO:0060271 cilium assembly IBA
 cellular_componentGO:0005929 cilium IBA
 cellular_componentGO:0030992 intraciliary transport particle B IDA
 cellular_componentGO:0036064 ciliary basal body ISO
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Intraflagellar transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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