ENSMUSG00000079018


Mus musculus

Features
Gene ID: ENSMUSG00000079018
  
Biological name :Ly6c1
  
Synonyms : Ly6c1 / Lymphocyte antigen 6C1 / P0CW02
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: D3
Gene start: 75044018
Gene end: 75048830
  
Corresponding Affymetrix probe sets: 10429568 (MoGene1.0st)   10429573 (MoGene1.0st)   1421571_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000139559
Ensembl peptide - ENSMUSP00000139799
Ensembl peptide - ENSMUSP00000140722
Ensembl peptide - ENSMUSP00000140622
Ensembl peptide - ENSMUSP00000139948
Ensembl peptide - ENSMUSP00000066954
Ensembl peptide - ENSMUSP00000137401
NCBI entrez gene - 17067     See in Manteia.
MGI - MGI:96882
RefSeq - XM_006520521
RefSeq - NM_001252055
RefSeq - NM_001252056
RefSeq - NM_001252057
RefSeq - NM_001252058
RefSeq - NM_010741
RefSeq Peptide - NP_034871
RefSeq Peptide - NP_001238984
RefSeq Peptide - NP_001238985
RefSeq Peptide - NP_001238986
RefSeq Peptide - NP_001238987
swissprot - A0A087WRG9
swissprot - P0CW02
swissprot - A0A087WRP7
swissprot - A0A087WPW7
swissprot - A0A087WNZ5
Ensembl - ENSMUSG00000079018
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ly6c2 / P0CW03 / Mus musculus lymphocyte antigen 6 complex, locus C2 (Ly6c2), transcript variant 1, mRNA.ENSMUSG0000002258473
Ly6i / Q9WU67 / Lymphocyte antigen 6I ENSMUSG0000002258652
Ly6a / P05533 / Lymphocyte antigen 6A-2/6E-1 ENSMUSG0000007560250
Ly6g / P35461 / Lymphocyte antigen 6G ENSMUSG0000002258248
Ly6f / P35460 / Lymphocyte antigen 6F ENSMUSG0000002258344
BC025446 / cDNA sequence BC025446ENSMUSG0000004772843


Protein motifs (from Interpro)
Interpro ID Name
 IPR016054  Ly-6 antigen/uPA receptor-like
 IPR018363  CD59 antigen, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009897 external side of plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr