ENSMUSG00000079620


Mus musculus

Features
Gene ID: ENSMUSG00000079620
  
Biological name :Muc4
  
Synonyms : Muc4 / mucin-4
  
Possible biological names infered from orthology : mucin 4, cell surface associated / Q99102
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: B3
Gene start: 32735886
Gene end: 32782391
  
Corresponding Affymetrix probe sets: 10435112 (MoGene1.0st)   1427398_at (Mouse Genome 430 2.0 Array)   1432119_at (Mouse Genome 430 2.0 Array)   1438555_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000093813
Ensembl peptide - ENSMUSP00000119154
Ensembl peptide - ENSMUSP00000119029
NCBI entrez gene - 140474     See in Manteia.
MGI - MGI:2153525
RefSeq - NM_080457
RefSeq Peptide - NP_536705
swissprot - E9Q9U1
swissprot - E9Q7Q0
swissprot - F6R2G3
Ensembl - ENSMUSG00000079620
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch73-105b23.6ENSDARG00000087190Danio rerio
 ENSGALG00000032657Gallus gallus
 MUC4ENSG00000145113Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Susd2 / Q9DBX3 / Sushi domain-containing protein 2 / Q9UGT4* / sushi domain containing 2*ENSMUSG000000063425


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR001846  von Willebrand factor, type D domain
 IPR003886  NIDO domain
 IPR005533  AMOP domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007160 cell-matrix adhesion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins
Termination of O-glycan biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0004502 decreased incidence of chemically-induced tumors "lower than normal frequency of tumor incidence induced by one or more chemical carcinogens or mutagens" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Pon3tm1Dmsh/Pon3tm1Dmsh
Genetic Background: B6J.129X1-Pon3tm1Dmsh

 MP:0008539 decreased susceptibility to induced colitis "decreased severity or induction threshold of colitis upon treatment of an organism with intestinal inflammation agents such as dextran sodium sulfate (DSS)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Pon3tm1Dmsh/Pon3tm1Dmsh
Genetic Background: B6J.129X1-Pon3tm1Dmsh

 MP:0013299 decreased susceptibility to colitis induced morbidity/mortality "reduced likelihood that an organism will display the expected moribund state caused by colitis upon treatment of an organism with intestinal inflammation agents such as dextran sodium sulfate (DSS)" [MGI:Annie_Speak]
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Allelic Composition: Pon3tm1Dmsh/Pon3tm1Dmsh
Genetic Background: B6J.129X1-Pon3tm1Dmsh

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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