ENSMUSG00000089773


Mus musculus

Features
Gene ID: ENSMUSG00000089773
  
Biological name :Skint1
  
Synonyms : A7TZE6 / Selection and upkeep of intraepithelial T-cells protein 1 / Skint1
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: D1
Gene start: 112006269
Gene end: 112029538
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSMUSP00000125313
Ensembl peptide - ENSMUSP00000125625
Ensembl peptide - ENSMUSP00000124545
Ensembl peptide - ENSMUSP00000124737
NCBI entrez gene - 639781     See in Manteia.
MGI - MGI:3649627
RefSeq - NM_001102662
RefSeq Peptide - NP_001096132
swissprot - A7TZE6
Ensembl - ENSMUSG00000089773
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BTN1A1ENSGALG00000000589Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A7XUX6 / Skint2 / selection and upkeep of intraepithelial T cells 2ENSMUSG0000003435959
A7TZF0 / Skint3 / Selection and upkeep of intraepithelial T-cells protein 3 ENSMUSG0000007086856
A7TZF3 / Skint4 / Mus musculus selection and upkeep of intraepithelial T cells 4 (Skint4), transcript variant 2, mRNA.ENSMUSG0000005596054
Skint5 / selection and upkeep of intraepithelial T-cells protein 5 isoform 1 ENSMUSG0000007859853
A7XUZ6 / Skint6 / Selection and upkeep of intraepithelial T-cells protein 6 ENSMUSG0000008719451
A7XV07 / Skint8 / Selection and upkeep of intraepithelial T-cells protein 8 ENSMUSG0000007859934
A7XV04 / Skint7 / Selection and upkeep of intraepithelial T-cells protein 7 ENSMUSG0000004921434
Btnl4 / butyrophilin-like 4ENSMUSG0000005843526
Btnl1 / Q7TST0 / Butyrophilin-like protein 1 ENSMUSG0000006263826
Btnl6 / butyrophilin-like 6ENSMUSG0000009261826
Btn1a1 / Q62556 / Butyrophilin subfamily 1 member A1 / Q13410*ENSMUSG0000000070626
A4QPC6 / Btn2a2 / Butyrophilin subfamily 2 member A2 / BTN2A1* / Q7KYR7* / Q8WVV5* / butyrophilin subfamily 2 member A1*ENSMUSG0000005321624
Btnl9 / Q8BJE2 / Butyrophilin-like protein 9 / Q6UXG8* / butyrophilin like 9*ENSMUSG0000004028323
Btnl2 / O70355 / Butyrophilin-like protein 2 / Q9UIR0* / butyrophilin like 2*ENSMUSG0000002434022
Btnl10 / Q9JK39 / Butyrophilin-like protein 10 ENSMUSG0000002049020
Ermap / erythroblast membrane associated protein (Scianna blood group) / Q96PL5*ENSMUSG0000002864420


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0033089 positive regulation of T cell differentiation in thymus IMP
 biological_processGO:0045059 positive thymic T cell selection IMP
 biological_processGO:0045582 positive regulation of T cell differentiation IDA
 cellular_componentGO:0016020 membrane ISM
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0071944 cell periphery IDA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002145 abnormal T lymphocyte development "atypical production of or inability to produce mature T cells, and/or accumulation of T cell precursors" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Stat1tm2.1Uvin/Stat1tm2.1Uvin
Genetic Background: B6.129P2-Stat1tm2.1Uvin

 MP:0008037 abnormal T cell morphology "any structural anomaly of lymphocytes that are responsible for cell-mediated immunity and immune system regulation" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Stat1tm2.1Uvin/Stat1tm2.1Uvin
Genetic Background: B6.129P2-Stat1tm2.1Uvin

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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