ENSMUSG00000099481


Mus musculus

Features
Gene ID: ENSMUSG00000099481
  
Biological name :Xndc1
  
Synonyms : Xndc1 / Xrcc1 N-terminal domain containing 1
  
Possible biological names infered from orthology : AP002495.1 / Putative short transient receptor potential channel 2-like protein / Q6ZNB5
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: E2
Gene start: 102065511
Gene end: 102083765
  
Corresponding Affymetrix probe sets: 1424492_at (Mouse Genome 430 2.0 Array)   1436854_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000102563
Ensembl peptide - ENSMUSP00000121475
Ensembl peptide - ENSMUSP00000117300
Ensembl peptide - ENSMUSP00000091680
NCBI entrez gene - 102443350     See in Manteia.
MGI - MGI:5546359
RefSeq - NM_001286690
RefSeq - NM_001286689
RefSeq Peptide - NP_001273619
RefSeq Peptide - NP_001273618
swissprot - D3Z526
swissprot - E9PVR2
swissprot - F6R278
Ensembl - ENSMUSG00000099481
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgc:110224ENSDARG00000032263Danio rerio
 ENSGALG00000017493Gallus gallus
 Q6ZNB5ENSG00000254469Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Xrcc1 / Q60596 / X-ray repair complementing defective repair in Chinese hamster cells 1 / P18887* / X-ray repair cross complementing 1*ENSMUSG0000005176822


Protein motifs (from Interpro)
Interpro ID Name
 IPR002706  DNA-repair protein Xrcc1, N-terminal
 IPR008979  Galactose-binding-like domain superfamily
 IPR010919  SAND-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000012 single strand break repair IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003684 damaged DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr