ENSDARG00000032263


Danio rerio

Features
Gene ID: ENSDARG00000032263
  
Biological name :zgc:110224
  
Synonyms : zgc:110224
  
Possible biological names infered from orthology : AP002495.1 / Putative short transient receptor potential channel 2-like protein / Q6ZNB5 / Xndc1 / Xrcc1 N-terminal domain containing 1
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 30721733
Gene end: 30742852
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000040442
NCBI entrez gene - 550335     See in Manteia.
RefSeq - NM_001017642
RefSeq Peptide - NP_001017642
swissprot - F1QU43
ZFIN ID - ZDB-GENE-050417-120
Ensembl - ENSDARG00000032263
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000017493Gallus gallus
 Q6ZNB5ENSG00000254469Homo sapiens
 Xndc1ENSMUSG00000099481Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
xrcc1 / X-ray repair complementing defective repair in Chinese hamster cells 1 / P18887* / Q60596* / X-ray repair cross complementing 1*ENSDARG0000000949421


Protein motifs (from Interpro)
Interpro ID Name
 IPR002706  DNA-repair protein Xrcc1, N-terminal
 IPR008979  Galactose-binding-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000012 single strand break repair IEA
 biological_processGO:0006284 base-excision repair IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003684 damaged DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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